Sphingopyxis sp. 113P3: LH20_18005
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Entry
LH20_18005 CDS
T04069
Name
(GenBank) hypothetical protein
Organism
sphp
Sphingopyxis sp. 113P3
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
ALC13854
LinkDB
All DBs
Position
complement(3643471..3649644)
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AA seq
2057 aa
AA seq
DB search
MTTNSTSSLRRFAKSALLVSAAFPISALIADSANAEQTVEVSAAETAASVQAKIDAAKAA
PDRDITITVTSKGEVTGPGTIGLAPAAGQGDGKIVFGNAGSIGDVDKAGAVTDIVGVALG
GSSAKADNKLTATNSGLITGGFSANGFGGTVSLDNSGTIHNGINIQGPGNLALTSSGAIR
SGDVLLQSVASVTSTTAGDTTTEVYKSGEVSAAFGDVGSADGKVKGDATFIAQVGNVNIE
AKGTAGDLVGYSGGSTVTVVNTSSAPVASKSVVTSEGSLVYEAGTVKIDTAATSKLDSVT
GVANGTVDIAVAGSVEGAVNATPAYNTNAANKTVVTRDSKDTVDLVRVDTYSSAAVTGDS
TISVTVTGAVGGAANAQATRDASIVNAGEVKGALNATAGAGSSTNAGSTTTTRNATGNLL
TIVDSNSSASAAGKAGIEIAEEASVGGSVSATATSDASVNNAGAVAGAVAARAGNGSQST
FDQTQSYDGKGVQLGLTTRSTNAPSAGNASVVIAETGSAGGTVLAFATNDASAENSGSVG
GNLNATAGNGTASVTEQALVFDSTGALVLSDVYEETFSRSKGNASVINEARGKVEGLVNA
SATEDVSVTNAGTIGGGVNGASSGNDTTYGRTILTAAPVVDATAGTTTTKYSYADESTNT
SSTGKVEFTNAAGGIVGFNSAGDVNLTAGGDITILNQGEVRGSTYAASGGSASSSGSTYA
STTVLDGKGGTSFTEERTQSDVYTATGGNVTGTYAGANGTTNFFPAAIGNVTQVADLAST
VNATGAIFGNVSSVAGNSGVANTSFESSSAATTVLDVDGSGAYTGKFSSESSSAMVAGGD
SKVIIAGQVARSNAGGSASVTSQGVNSSTVVVSGSVADNVASNALGAAAQTSDESGNIAQ
TITKGSYVTDELTTKTSGTLVVSDGASSVVIDGKATASQDTVGGSVTVNGVGSASAEVGA
KAIVGGNLSVSANNGIDSETSTARLYVRDATTGVATASENSSATYGAAAAQGDASATIEG
TVKGGTSVNAGRGDATVTLTGVSEDYVSALAASSVTKSEAAREWTGNTKSSSDDFGTLVG
GLSGRTFEESVSTQTTTIGGKATVLVDSAQALKDKAAAATDNVYAAGVSGASVTITNGSI
VTSDVGAESYVFNSVDTNTTSDDGKGTVNLTSSTTTTIVGGPATITNAGLIGDDARAASA
TSATVSNTGQIGDVASASAIVIGSNATSATTNFGKASLQSVTETFTPVVALGTASVTNAE
GATIGGDIFVDAGEGTVTNDGTVAGTTVLGRNIDTASVTEVRTDTSTDTSYTPAAALLAQ
TYTVNQNGVAGGFAVIGGLDNDPTGEGATLTSDVKATINLNSGSATLGSITGERDADGNR
TTNTTVNLVGSGFLGADAILYPNQSWPLGDDRPNPLLSLGKDAQTHFGGSNYQVRVVGVE
TLNKEGAGTFVINGAPYDPGLPGDEPAYTLDVGNFNINAGEIQLTTSQSDGAEFGVRGNI
NNAATLVVGRRITPGQNLFGNSLVGQTELIDGITLRQVGDFNQSAEGTIIVGVTPTLIRV
QRSEVSGGASLPEPLGPVAGGVYVGYFTTPQALGYDADNSRVDITGNLNLAGNVAVNVYR
DSLYANGDGYTLFTYTGTGAVSAAAMPTLTSPYVGFSLVHDTTTKEVRLEVKRSSYAGGA
TNLNSVAAAVGLDTALNSAIGRIRNDAAGGAGFASVTELGYAQDIANVATALDFRLSSDQ
AAALFNELSSGEIYGSLAAVDQNGVFGQTLDMLANRRSVGGDFATQLWLNPVGNWAKFGD
GDPYGASNIRANSYGLAGGLDFAYAPSGAFGFGGAYAEHDIAARGTPEAVDGRTWTVGAY
VTQGFGPIYANAKLAFGWTNYDATRTMSLLARTAEASINAKQLDASVEVGYDYRTGNVTV
TPYGKLVLRRTSLEGFTESGAGAFSLDVEGRAKTVFSPVLGVKLSTETEVSDSVTLRPFA
KASYTFQGDLPNDVTVSYIGGGDKFVLRGAQPDSYGTVEAGFEATVADRLNLFFTGSQIF
GGDNKVTGLRGGVTFQF
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaactccacttcttccttgcgccgcttcgccaagagtgcgctgctggtttca
gccgccttcccgatttcagcgctgatcgcggacagtgcgaacgccgagcagacggtggag
gtgagcgccgcggaaacggccgcgagcgtccaggcgaaaatcgatgctgccaaggcggcg
cctgatcgcgacatcacgatcaccgtgacgtccaagggtgaggtgacgggtcccgggacg
atcgggctcgctcccgcggcaggacagggcgatggcaagatagtcttcggtaacgccggc
agcatcggcgatgtcgacaaggccggcgccgtgaccgatatcgtcggcgttgctctcggc
ggttcgtccgcgaaggccgataacaagctgaccgccacgaacagcggtctcatcacaggc
ggcttctcggcgaatgggttcggcgggaccgtctcgctcgacaatagcgggacgattcac
aatggaatcaacatccagggccccggtaatcttgcgctgacctcctcgggcgccattcgc
tcgggtgatgtcctccttcaatcggtcgccagcgtcacgtcgaccacggccggcgacacg
acgactgaagtctacaagagcggcgaggtcagtgccgccttcggcgacgtcgggagtgct
gacggcaaggtaaaaggcgatgcgaccttcattgcgcaggtcggtaacgtcaacatcgag
gcgaagggtacggcgggagacctcgtgggctattcaggcggctcgaccgtcaccgtggtc
aacacctcctccgctccggtcgccagcaaatcggttgtgaccagcgaagggagccttgtc
tacgaggccggcaccgtcaagattgacacggctgcgaccagcaagctcgattccgtcacg
ggcgtcgccaacggtaccgtcgatatcgcagtcgccggaagcgtcgaaggtgctgtgaat
gcaactccggcgtataacaccaacgcggcgaacaagactgtcgtgacgcgcgacagcaag
gacaccgtcgatctggtacgcgtcgatacctacagcagcgctgcggtcacgggcgattca
acgatcagcgtcactgtgaccggagctgtcggcggggcggccaatgcccaagcgacgcgc
gatgcgtcgatcgtcaacgctggcgaggtcaagggcgcgctgaatgcgaccgcaggggcg
ggttcctcgacgaatgccggtagcacgacgacgacgcggaacgccaccggcaatctgctc
acgattgtggactcgaacagctcggcaagtgcggccggcaaggctgggatcgaaattgcc
gaggaggcttccgttggagggagtgtgtccgccacggcgaccagcgatgcgtcggtgaac
aatgccggcgcagtcgctggcgccgtggcggctcgggccggcaacggctcccagtcgact
tttgatcagacgcaatcttatgacggtaagggcgttcagctcggcctcaccacaaggtcg
acgaatgcgccatccgcaggcaacgcttcggtggtgattgccgaaaccgggtcggcgggc
ggcaccgtgcttgcattcgcgaccaacgatgcctcggcggagaatagcggttcggtcggc
ggcaatctcaacgctacggcagggaacggcacggccagcgttaccgagcaggcgctcgtg
ttcgacagcaccggcgcacttgttcttagcgatgtctatgaggagactttttcacgctcg
aagggcaatgccagcgtcatcaatgaagcgcgcggcaaggtcgaaggcttggtcaatgcg
agtgcgaccgaggatgtctccgtcaccaatgccggtacgatcggaggaggcgtgaatggg
gcttcgtcgggcaacgacacgacttatggccgcaccatcctgaccgccgctccggttgtc
gacgccaccgccgggacgacgaccaccaagtacagctatgctgacgaatcgaccaatacg
tcctcaacgggcaaggtcgaattcaccaacgcagccggtgggatcgtcggcttcaacagc
gcgggggatgtaaatctgaccgcaggcggcgatatcacgatcctcaaccaaggtgaggtc
cgcggctcgacctatgccgcgagcggtggcagcgcatcgtcaagcggcagcacgtatgcc
tcgacgactgtgctcgacggcaagggtggaaccagtttcaccgaggagcggacacaaagc
gatgtatacaccgcgacaggcgggaacgtcactggcacctatgccggggcaaatggcacg
acgaacttcttccccgccgcgataggaaacgtgacgcaggttgccgatctggcgagcacc
gtgaacgcgaccggagcgatcttcggcaacgtcagctcggtggcgggcaattcaggggtg
gctaacacgtcatttgagagcagtagcgccgcgacgaccgttctcgatgtcgacggctcg
ggcgcttatacgggcaaatttagctccgaatcgtcgtcggctatggtcgccgggggtgac
agcaaggttatcatcgcggggcaggtcgcgcgcagtaacgcaggcggcagcgccagtgtc
acttcgcagggtgtaaactcctcgacggtggtcgtcagcggctcggttgcagacaatgtg
gccagcaacgccttgggcgcagcggcccagacctcggacgagtcgggcaacatcgcccag
acaatcacgaagggaagttacgtcacggacgaactcaccacgaaaaccagtggcacctta
gtcgtctcagacggtgcgagctcggttgtgatcgacggtaaggcaacggcaagccaggat
accgttggcgggtcggttaccgtcaatggcgtagggtcggcctcggccgaagttggagcc
aaggcgatcgtcggcggcaatctctcggtcagtgccaacaatggcatcgacagcgagact
tcgaccgcgcggttgtatgtccgcgatgcgaccactggagtggcgacggcttcggaaaat
tcgagtgcaacctatggcgccgcggcagctcaaggcgatgcttcggcgacgatcgagggc
accgtcaaaggcggtacatctgtaaatgcgggccgcggcgatgcgaccgtcaccttgacg
ggcgtctcggaagactatgtgagcgcgcttgccgcaagcagcgtcaccaagtccgaggcg
gcgcgcgaatggacaggcaacaccaaatcgtcgtcggatgatttcggcacgctcgtcgga
ggcctctcgggccggaccttcgaggaaagcgtctcaacccaaacgaccacgatcggcggc
aaggcgacagtgctggtcgactccgcgcaggcgctcaaggacaaagcggccgctgccacc
gataacgtctatgcggcaggcgtcagcggcgcttcggtcacgatcactaatggatcgatc
gtgaccagcgacgtcggtgctgaaagctatgtgttcaactccgtcgataccaacacgacg
agcgacgacggcaagggcacggtgaacctcacgagctcgacgacgaccacgatcgtcggc
ggtccggccacgattaccaacgcgggcttgatcggcgatgatgcacgcgccgctagcgca
acctcggcgacggtcagcaatacgggtcagattggcgacgtggccagcgcgagcgcgatc
gttatcggttcaaacgcgaccagcgcgacgaccaactttggcaaggcctcgttgcagtcg
gtcaccgagaccttcactccggtcgtggcgctcggcacggccagcgtaacgaacgctgag
ggtgccacgatcgggggcgatatcttcgtcgacgccggcgaaggcacggtgacgaacgat
ggaacggtcgccggcaccaccgtcctcggccgaaatattgacacggcatcggtcaccgag
gttcgcaccgatacttcgaccgacaccagctacacgccggcagccgcgcttcttgctcag
acctatacggtgaaccagaatggcgttgcagggggctttgcggtcatcggcggtctcgac
aatgatccaaccggcgagggggcgacgctgaccagcgatgtgaaggcgacgatcaacctc
aattcgggctcggcgacgcttggcagcatcaccggcgagcgcgatgcagacggtaacagg
acaaccaataccacggtcaatctggtcggctcgggcttccttggcgccgatgcgatcctc
tacccgaaccagagctggccgctcggcgatgacaggcccaatccgctgctctcactcggc
aaggacgcacagacccatttcggtggctcgaactatcaggttcgcgtcgtcggcgtcgag
acgttgaacaaagaaggcgcgggcacgttcgtgatcaacggcgcgccctatgaccccggg
ctcccgggcgatgagcctgcctacacgctcgatgtcggcaacttcaacatcaatgcgggc
gagattcagctaacgacgagccagtccgacggcgctgaattcggtgtgcgcggcaacata
aacaacgccgcgacgctcgtcgtcggtcgccgcatcacgccgggccagaacctgttcggc
aacagcctggttggccagaccgaactgatcgacggcatcaccctccgtcaggtcggcgac
ttcaatcagagcgcggagggcacaatcatagttggcgtcacgccgacgctgattcgtgta
cagcgaagcgaggtttcgggtggggcgagccttcccgagccgctcggtccggtggcaggc
ggcgtctatgtcggctactttactacgccgcaggcgctcggctatgatgccgataactcg
cgcgtcgacatcaccggtaacttgaacctggccggcaacgtcgcggtgaacgtctatcgt
gacagcctctacgccaatggcgacggctacacgttgtttacctacaccggtacgggagcc
gtctcggcggcggcaatgccgacgctgacctcgccctatgtaggcttctcgctggtgcat
gacacgaccacgaaggaagtgcgcctcgaggtgaagcgcagcagctatgcgggcggcgcg
accaacttgaactccgtcgctgcggcggtcggcctagacacggcactgaactcggcgatc
ggccgcatccggaacgatgcggcgggcggcgcaggtttcgcgtcggtgaccgaacttggc
tatgcacaggacatcgccaatgtcgcgaccgcgcttgacttccgcctgtcgtcggatcag
gcggccgcgcttttcaacgaactgtcttcgggcgagatctatggttcactcgcggccgtc
gatcagaatggtgtcttcggacagacgctggacatgctcgcgaaccgtcgttcggtcggg
ggcgactttgcgacacaactttggctaaacccggtgggcaactgggcgaagtttggtgac
ggcgatccctatggtgcttcgaacatccgcgcgaacagctacggtctcgcgggcggtctc
gacttcgcctacgcgccgagtggcgccttcggattcggcggcgcttatgccgagcacgac
attgccgcgcgcggcacgccggaagcggtcgacggccgaacctggactgtcggtgcctat
gtcacgcagggcttcgggccgatctatgctaacgcaaagctggcctttggctggaccaac
tacgacgcaacccgcacgatgagcctcttggcccggaccgcggaagcctcgataaacgcc
aagcaactcgatgcaagcgtcgaggtcggctatgactatcgcaccggcaatgtgacggtc
acaccttatggcaagctggttctgcgccgtacctcgctggaaggcttcaccgaaagcggt
gcaggcgccttcagtctggatgtcgaaggccgggcgaagacggtcttctcgccggtgctt
ggcgtgaagctcagcaccgaaactgaagtctcggacagcgttacgcttcgtcccttcgcc
aaggcgtcgtacaccttccaaggcgatctgccgaacgatgtgacggtgagctacatcggc
ggcggcgacaagttcgtccttcgaggtgcccagcccgacagttacggcacggtcgaagcc
ggtttcgaggcgacggtagccgaccggctcaatctgttcttcaccggcagccaaatcttc
ggcggagacaataaggttacaggccttcgcggcggtgtgactttccagttctaa
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