Sphingopyxis sp. 113P3: LH20_18685
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Entry
LH20_18685 CDS
T04069
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00071
Fatty acid degradation
sphp00362
Benzoate degradation
sphp00650
Butanoate metabolism
sphp01100
Metabolic pathways
sphp01120
Microbial metabolism in diverse environments
sphp01200
Carbon metabolism
sphp01212
Fatty acid metabolism
Module
sphp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LH20_18685
09103 Lipid metabolism
00071 Fatty acid degradation
LH20_18685
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LH20_18685
Enzymes [BR:
sphp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LH20_18685
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Semialdhyde_dh
F420_oxidored
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ALC13989
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Position
3787993..3790026
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AA seq
677 aa
AA seq
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MSDETPVSVTMEKDGEVAVVIVNNPPVNALSWHVREGLKTQFEAALADDSVKAIVLRCDG
GTFIAGADISEFGKAPRGPDFNAVLNMVEAATKPVVAAIHGTALGGGLETALVCHYRVAV
PSAKLGVPEVKLGLLPGAGGTQRLPRVVGVEAAATMTSLGEPLPAAKAKELGLVDELAGE
DSLAADAIAFARAKIADGPRPTRERAVFGDVGVIEELKTKNAKRWRGFEAPYANLACVEA
ATRLPFEEGLAFERQEFMKLMMGSQSAAQRHIFFAERQAAKIDGLPKDIKLREVKKVGII
GAGTMGGGIMMNFLQKGFACTIVEMQQEALDRGLGVVRKNYDASAAKGRFKPEQVDQMMG
LITPSLDLEALADCDLIIEAVYENMDVKKEIFGKLDTIAKPGAILASNTSYLDVNEIAAS
TSRPGDVLGMHFFSPANVMKLLEVVRGDKTADDVLATAMAIGKKIGKVAVVAGVCHGFIG
NRMLAPRQIEAQKLLLEGATPAQVDKVHVDFGMPMGPFQMSDLAGVDIGWHRDPNRIESI
RDALCAEGRWGQKKQAGFYDYDDKRNPSESARVAEIIDEFRKKAGIEKREISEQEIIERT
LYPMVNEGALILAEGKAQRASDIDVVWIYGYGWPVYRGGPMFWAGLEGTDKIAAALEKHG
FEVAPLLKEKAEAKSGF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgaaacccccgtcagcgttaccatggaaaaggacggcgaagttgccgtcgtc
atcgtcaacaatccgcccgtcaacgcgctgtcgtggcatgtgagggaagggctgaagacc
caattcgaggccgcgctcgccgatgacagcgtcaaggccatcgtgctgcgctgcgacggc
ggcaccttcatcgccggcgccgacatcagcgaattcggaaaagccccgcgcggccctgat
ttcaatgccgtcctcaacatggttgaagctgccaccaagccggtggtcgcggcgatccac
ggcacagcactcggcggcgggctcgagaccgcgctcgtctgtcattatcgcgtcgccgtt
ccctctgccaagctcggcgtgcccgaggtcaagctcggcctgctgcccggcgccgggggc
acccagcgcctgccccgcgtcgtgggcgtcgaggctgccgcgaccatgacctcgctcggt
gagccgcttccagccgcgaaggcgaaggaactcgggctcgtcgacgaactcgcgggcgag
gatagcctcgccgccgatgccatcgcttttgcacgcgccaagatcgcggatggcccgcgc
ccgacccgcgaacgcgcggtgttcggcgacgtcggcgtgatcgaggagctcaagaccaag
aatgcgaagcgctggcgcggcttcgaggcaccctacgccaacctcgcctgtgtcgaggcc
gcgacgcgtctgcctttcgaggaaggactcgccttcgaacgccaggaattcatgaagctg
atgatgggcagccagtcggcggcgcagcgccacatcttcttcgccgagcgccaggccgcg
aagatcgacggcctgcccaaggatatcaagctgcgcgaggtgaagaaggtcgggatcatc
ggcgccggcacgatgggcgggggcatcatgatgaacttcctgcaaaagggctttgcctgc
accatcgtcgagatgcagcaggaggcgctcgaccgcgggctcggtgtcgtgcgcaagaat
tatgatgccagcgcagcgaagggccgcttcaagcccgagcaggtcgatcagatgatgggg
ctcatcaccccgtcgctcgacctcgaagcgctcgccgactgcgacctcatcatcgaggcc
gtctacgagaatatggacgtgaagaaggagattttcggcaagctcgacacgatcgccaag
cctggcgcaattctcgcgtcgaacacctcctatctcgatgtcaacgagattgcggcatcg
acgagccgcccgggcgacgtgctcggtatgcacttcttctcgcccgcgaatgtcatgaag
ctgctcgaggtcgtgcggggggacaagaccgccgacgacgtgctcgcgaccgcgatggcg
ataggaaagaagatcggcaaggtcgccgtcgtcgccggcgtctgtcacggcttcatcggc
aaccgcatgctcgcgccgcgccagatcgaggcgcagaagctgctgctcgagggtgcgacc
cccgcgcaggtcgacaaggtccatgtcgatttcggcatgccgatgggccccttccagatg
agcgaccttgccggcgtcgacatcggctggcaccgcgaccccaaccgtatcgagagcatc
cgcgatgcgctgtgcgccgagggccgctgggggcagaagaagcaggccggcttctacgat
tatgacgacaagcgcaatccgtcggaaagtgcgcgtgtcgcagagatcatcgacgagttc
cgcaagaaggcgggaatcgagaagcgcgagatcagcgagcaggaaatcattgagcgcacc
ctatatccgatggtcaacgaaggcgcgctgatcctcgctgaaggcaaggcgcagcgcgca
agcgacatcgatgtcgtctggatctacggctacggctggcctgtctatcgtggcggtccg
atgttctgggcggggctcgaaggcaccgacaagattgccgccgccctcgagaagcacggc
tttgaagtcgcgccgctgctcaaggaaaaggcagaggcgaaaagcggcttttaa
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