Sphingopyxis sp. 113P3: LH20_19790
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Entry
LH20_19790 CDS
T04069
Name
(GenBank) FecI sigma-24 factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphp03021
]
LH20_19790
Transcription machinery [BR:
sphp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LH20_19790
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HopW1-1
Motif
Other DBs
NCBI-ProteinID:
ALC14207
UniProt:
A0A0M4DDG4
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All DBs
Position
complement(4031652..4032236)
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AA seq
194 aa
AA seq
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MSADLSQCSDQDLAAFARAHREDAYRELLRRYKTGVYRLIVKQIGDADEAMDLTQETFVS
GFSALDRYDGERPFRTWIARIALNKCRDWARRRKVGAFFSRALPLENAHHVASDGPGPDS
AATDRRELAKVRGAIDQLPQNLREVLLLRGVDEVSQAETAVILRVSEKTVETRLYRARTR
LRELLAGTSASAEG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgatctatcgcaatgtagcgaccaggatctggcggcctttgcgcgcgcgcac
cgcgaagacgcctatcgcgagttgctgcgccgttacaaaacgggcgtctaccggctcatc
gtaaagcagatcggcgatgccgacgaggcgatggatctgacgcaagagacgttcgtctcc
ggcttttcggcgctcgatcgctatgatggcgaacgccccttccgcacatggatcgcccgt
atcgcgctcaacaaatgtcgcgactgggcacgacggcgaaaggtgggcgcctttttctcc
cgcgcgctcccgctcgaaaatgcgcatcacgtagcaagcgatggtcctgggcccgattcc
gcggcgaccgacaggcgagagctcgccaaggttcgcggggcgatcgatcagctgccgcag
aatttgcgcgaagtgttgctcctccgcggtgtcgacgaggtcagccaggccgaaacagcg
gtcattttgcgcgtcagcgagaaaacagtcgaaacgcgcctctatcgagcgcggaccagg
ctccgggaattgctcgcgggaacatctgcgagcgccgagggttga
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