Sphingopyxis sp. 113P3: LH20_19905
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Entry
LH20_19905 CDS
T04069
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphp02000
]
LH20_19905
Transporters [BR:
sphp02000
]
Other transporters
Pores ion channels [TC:
1
]
LH20_19905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF2341
Motif
Other DBs
NCBI-ProteinID:
ALC14230
LinkDB
All DBs
Position
4056656..4059751
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AA seq
1031 aa
AA seq
DB search
MTNRTYSNYRKHILAAASLIGMIAAQNAAAQEQAAETQAATEPQSAPRGEEIVVTGSRIA
GTKITEALPVTVVGEDEIAATAAVSGDELLRSIPQMSDQSFNSSNGQTSSNFARGDVGSI
DLRGLGVGNTLVLLNGRRLVQHPSSQASTSLAPVITYNSNSIPVFGIQRVEVLRDGAAAL
YGTDAVAGVVNTILRDNVNGGGLSVQYGGAEGTGLREFNGSGYLGTDFAENRGNISLLFN
YTNRTALSSQDQDYTATSDHRFFDDFAGTVFAGSNSLDDTSTLSQWGNFTTGVRVRRGTT
NITTTGGVFSIQPTANGGCSADLGGGICIDDATRATTGADRNTRWDAQANYPLSIIPRLD
RVNVFANGHYDLSDNLTVFGEAGYYYAKTRSIQDSVFSIGSIQMTVPASNYWNPFGPVTF
ANGTLNPNRLAGIDAPAAGLPVTITSYRFVDMGPTVVDVTNRQFRALLGLRGEALGFNWE
TAALYSQATVRDVQDGISATLLQQSLALSTPDAYNPFNGGSATNPTGPDTTPSNQAALDA
IAIKTVRAGKSTLAQWDFRASKADLLTLPAGNVGMALGFELRRDSYLDDRDERVDGTITW
TDTVTGIVQPSDLFGVSPTPDTKGSRTVFAAYSELAVPLIAPEMNVPLIRSLELQLAGRY
EHYSDFGSIAKPKVAAAWDLFDGWRIRGSWAQGFRAPNLEQTKATIITRGNTRTDYIRCE
ADLRAGRITSFDACAQGFVTTGRRAGNPDLKPETSTTWTIGTVLQPPAFNTGRLRTTFTV
DYWQVKQKGIVGVFGEGNALISDYLLRLQGSSDPTVVRLAPTADDIALFAGTGIAPVGRV
QYVDDQYRNLEPQTVRGIDFGLNVGLRDTGIGDFTMSANAAYLLKYFRDVSPDIRVLLDA
RAAGDINIDTVIPEGGNQVRRDAFPKWRGSASLTWKLGQFTAGGFVSYTGSVIDNDISIG
GENLIVKAYTTASLYVQYDLKGGFTDGTQLRVGVRNITNAQPPIDSSGFGYMGSLHSPIP
RYWYVNVRKTF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccgcacatattcgaactaccgcaagcatattctcgccgcagcatcgctgatc
ggaatgatcgccgcacaaaacgcggccgcccaggaacaggcggcggagacccaggccgcg
accgagccgcaatcggctccccgcggcgaagaaatcgtcgtgaccggcagtcgcatcgct
ggcaccaagatcaccgaagccttgcccgtgaccgtggtcggcgaggacgagattgcggcg
accgctgcggtgtcgggcgacgaactgttgcggtcgatcccgcaaatgagcgaccagtcg
ttcaacagcagcaatggtcagacgagcagcaatttcgcgcgcggcgacgtcgggtccatc
gatctgcgcggactgggagtcggcaacacgctggtcctgctcaacgggcgccggcttgtg
cagcacccaagcagccaggcgagcacgtcgctggcgccggtcatcacctataatagcaac
tcaatcccggtcttcggtatccagcgcgtcgaagtgctccgcgacggcgcggcagccctc
tatggcaccgacgccgtggcgggcgtggtcaacaccatccttcgcgacaatgtgaacggc
ggcggtttgtcggtccaatatggcggagcagagggaacggggctgcgcgaattcaacggc
tcaggttatctcggcaccgacttcgccgagaatcgcggcaatatttcgctgctgttcaac
tacaccaaccgcacggcgctgtcctcacaggaccaggattataccgcgacatccgatcac
cgcttcttcgacgatttcgcggggacagtgttcgctggctcgaacagcttggacgacacc
agcactttgtcccagtggggcaatttcaccaccggcgttcgcgtacgccgcggaacgacc
aatatcacgaccacgggcggggtgttttcgatccagccgacagcaaatggcggctgctcg
gccgatctggggggcgggatctgtatcgatgatgcgacgcgtgccacgaccggcgctgat
cgcaacacaaggtgggacgcccaagccaattatccgctttcgattattccccggctggat
cgtgtcaacgtgttcgcgaacggccactatgacctcagcgacaatctgaccgtcttcggc
gaagccggctattattatgccaagacgcggagcatccaggacagcgtcttctcgatcggt
tcgatccagatgacggtgccggcgtccaactactggaacccctttggccccgtaaccttc
gccaatggcacgttaaacccgaaccgcctcgcggggatcgacgcgcccgccgccggcctg
ccggtgacgatcacaagctatcgttttgtggacatgggaccaaccgtcgtcgatgtcacc
aaccgccagttccgggcattgctggggcttcgcggcgaggcgctcggtttcaactgggag
acggcggcgctctattcgcaagcaacggtccgcgatgttcaggatgggatcagcgccacg
cttctccagcaaagcctcgcgctctcgacgcccgatgcctataatccgttcaatggcggc
agcgcgaccaatccgaccggtcccgacacgacacctagcaatcaggccgctctcgacgct
atcgcgatcaagactgttcgcgcgggcaaatctacgctggcgcagtgggattttcgggca
tcgaaggccgatcttctgacgttgcccgccggcaacgtcggcatggcgcttggctttgag
ctgcgtcgcgattcctatctcgacgaccgcgacgagcgcgtcgacggaacaatcacctgg
acagacacggtcaccggtattgtccagccatccgacttgttcggcgtcagcccgaccccc
gacaccaagggctcgcgcacggttttcgctgcctactccgaactggccgtgccactgatc
gcgcccgaaatgaatgttccgctcattcgcagcctcgagctacagctggcgggccgctac
gagcattattcggatttcggcagcatcgcgaaacccaaggtggccgccgcttgggacctc
ttcgatggctggcgaatccgcggctcgtgggcgcaaggcttccgcgcgccgaacctcgag
cagaccaaggcaacgatcatcacacgcggcaatacgcggaccgattatatccgctgcgag
gccgatttgcgcgcgggccgcatcaccagcttcgacgcttgcgcccaaggttttgttacc
accggacggcgcgcgggcaaccccgacctgaagccggaaacctcgaccacctggacgatc
ggtactgtgctccagccgccggccttcaataccggccgactccgcaccaccttcacggtg
gactattggcaggtcaagcagaagggcatcgtcggcgtattcggcgaaggcaacgcgctc
atcagcgattatctcctccgccttcaggggtcaagcgatcccaccgtggtccgcctggcg
ccgacggccgacgatatcgcattgttcgccgggactggcatcgcaccggtcggtcgggtg
caatatgtcgacgaccagtatcgcaacctggaaccacagacggtgcgcgggatcgatttc
gggctcaacgtcgggcttcgcgacacgggaatcggcgatttcaccatgtccgccaacgcg
gcctatctgctcaaatatttccgcgacgtgtcccctgacatccgggtcctgctcgatgcg
cgcgcggcgggcgacatcaacatcgacacggtcattccggaaggcggtaatcaggttcgc
cgcgacgctttcccaaaatggcgcggctcggcctcgcttacttggaagcttgggcaattc
acggctggcggctttgtaagctacaccggcagcgtcatcgacaacgacatttcgatcggc
ggagaaaacctgatcgtaaaggcgtacaccaccgcgagcctgtatgtgcagtatgacctt
aaaggcgggttcaccgatggaacccaactgcgtgtcggagttcgcaacattaccaatgcg
caaccgccgattgattcgagcggcttcggctacatgggttcgcttcattcgccgatcccg
cgctactggtacgtcaacgtccgcaagactttctga
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