KEGG   Sphingopyxis sp. 113P3: LH20_20130
Entry
LH20_20130        CDS       T04069                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sphp  Sphingopyxis sp. 113P3
Pathway
sphp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LH20_20130
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphp02044]
    LH20_20130
Enzymes [BR:sphp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     LH20_20130
Secretion system [BR:sphp02044]
 Type IV secretion system
  Trb secretion system protein
   LH20_20130
SSDB
Motif
Pfam: T2SSE AAA_16 nSTAND3 Zeta_toxin Mg_chelatase TrwB_AAD_bind FtsK_SpoIIIE AAA_22 ABC_tran AAA_25 Sigma54_activat DEAD AAA_19 DUF87 SLFN-g3_helicase AAA_7 AAA_28 AAA RsgA_GTPase CbiA AAA_18 AAA_30 AAA_29 ResIII ATPase IstB_IS21 Septin PCMT TsaE DUF815 NACHT Sigma54_activ_2 ABC_ATPase cobW TIP49 GTP_EFTU AAA_2 MobB MMR_HSR1 AAA_10 P-loop_TraG AAA_23
Other DBs
NCBI-ProteinID: ALC14275
UniProt: A0A0M4DD45
LinkDB
Position
complement(4108447..4109427)
AA seq 326 aa
MAAEPIRLEARNRSARMLQTAFGAAIAGWLADPQVVEIMLNPDGRLWVDRLGEGIADSGT
CLSAADGERIIRLVAHHVGAEVHGRSPRVSAELPGGGERFEGLLPPVVIAPAFAIRKPAA
AVFTLDDYVGARIMAPAAAAALRHAVAGRMNILVAGGTGTGKTTLANALLAEIAGTDDRI
ILIEDIRELQCAARNVVAMRTKDGIASLTDLVRSSLRLRPDRIPIGEVRGPEALDLLKAW
GTGHPGGIGTIHAGSALGALRRMEQLIQEAVVTAPRALLAETIDLVAVLVRDGTGRRLSE
LARVEGLDPATGAYRLVPHQQEGESS
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcagcagaaccgatccggctcgaagcgcgaaatcgcagcgcgcgcatgttgcagacc
gcattcggagcggcgatcgccggttggcttgccgacccgcaagtcgtcgagatcatgctc
aatccggacggccgcctctgggtcgaccggctcggcgagggcatcgcggacagcggtaca
tgtctgagcgcggcggatggcgaacgcatcatccgtctcgtcgcgcatcatgtcggcgcc
gaagttcatggcaggagtccccgcgtatcggccgaactgcctggcggcggcgaacggttc
gaaggattgctgccgcccgtcgtgatcgctccggccttcgcgatccgcaagccggcggca
gccgttttcacgctcgacgactatgtgggcgcgcgcatcatggcgccagctgccgccgcc
gcgctgcggcatgcggtcgccgggcggatgaacattctcgtcgccggcggcaccggaacc
ggcaagacgacgctcgccaacgcgctgctcgccgagatcgccggcaccgatgaccggatc
atcctcatcgaggatattcgcgagttgcagtgcgccgcgcgcaatgtcgtcgccatgcgc
accaaggacgggattgcatcgctcaccgacctcgtgcgctcgtcactccgcctccggccc
gatcgcattccgatcggcgaggtgcgcggccccgaagcgctcgatctgctgaaggcctgg
gggacggggcatccgggcgggatcggtacgatccacgccggaagcgcgctcggggcgctc
cgccgcatggagcaactcatccaggaggcggtcgtcaccgcgccgcgcgcgctgcttgcc
gaaaccatcgaccttgttgccgtcctcgtccgcgacgggaccggccggcgcctgtccgaa
ctggcgcgggtcgaagggctcgatcccgccaccggcgcatatcgccttgtcccgcaccaa
caagaaggagaaagctcatga

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