Sphingopyxis sp. 113P3: LH20_20460
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Entry
LH20_20460 CDS
T04069
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphp02000
]
LH20_20460
Transporters [BR:
sphp02000
]
Other transporters
Pores ion channels [TC:
1
]
LH20_20460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
ALC14340
LinkDB
All DBs
Position
4164672..4167200
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AA seq
842 aa
AA seq
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MMSGKSRFCLSLMVGIACLHPIAAAAQMQDRQSFDLPTQDLGDALRKVAEQAGIELYASS
ADLAGRRTGPLKGDITPREAIETLLRGTGLTPRFERGSVIILGRAQSASSPAQEDIVVTG
SRVSGAPSAAPVIRVTSEDIRNGGQADLGEVARSLPQNFGGGQNPGIGSGQGTQNQNVNV
NGASTFNLRGIGPSATLTLLNGNRFAYSGTQSVIDISAIPAAAVERIEIVADGASAIYGA
DAVAGVVNILLRKDYEGVTTSARLGGSTDGGNFQQQYNLLGGAKWSGGGFMATYDYFDNS
AILARDRSYTATSNPASTLYPSLKRHSLLLSGHQELTPSLRLKADVIYKRGDMQSVRGLL
ADRPITTRGLVVDNEFETFGMAPTLEAEIGGAWTARLTGFYGTDKTYGVTQNFTNDVEAR
SIRIFDNRSVSVEAGIEGPLFTLPGGDVRLAAGGGWRSNRIVALVAGRNFAPTRENRFAY
GELFVPLAGPAQDLAFAHRASITAALRWEDYSDSGSIVTPKLGFVYAPAPELSLGVSWGR
SFKMPTLNQQYSGYTPVLLPVTGYGTLFPPGATYLYIGGPNPDVGPERSENMTLSATFQP
SPRLQIVTSLFRIDYRDRVAPPFGSPLGILTNPLFTSLVTFNPSAAQLDAAIVRASDPLG
NATGGPYNPANVIALIDGRDRNIASQRYEGADLSLRYRAPVGGGRTLTVTVNATWLDSRQ
QLLPGLPVTDLAGTIFNSPHFRARGGATFGDERFTIASFVNFTGGVTDRRRAVPAKVSPV
ATVDLAGRIKISGLAELSVNALNIFNAKPDRTAVASPSDTPFDSTNYSAIGRFFGLTISR
DW
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccggaaagtctcgtttttgcctgtcgctgatggtcggtatagcctgtctgcat
cccatcgccgccgcggctcagatgcaggatcgccagagcttcgacctgccgacgcaggat
ctcggcgatgctttgcgaaaagtggccgagcaagccgggatcgaactttacgcgtcgagt
gccgatctcgcgggccgtaggaccgggccgctcaagggcgacatcaccccgcgcgaagcc
atcgagaccctgctgcgcgggaccgggctgaccccgcgcttcgagcgcggttcggtcatc
attttggggagagcgcagtccgcgagcagtccggcgcaagaagacatcgtcgtgaccggc
agccgggtctccggcgccccgtccgcagccccggtgatccgcgtgacgagcgaagatatc
cgcaacggcggtcaagccgatctcggcgaggtcgcgcgcagtctcccgcagaatttcggc
ggcgggcagaaccccggcatcggttcgggccaaggcacccagaaccagaatgtcaacgtt
aacggggcgtcgaccttcaacctgagaggcatcggacccagcgcaacgctgacgctgctc
aacggcaaccggtttgcctacagcggcacgcaaagcgtgatcgatatcagcgcgatacct
gctgcggcggtcgaacggatcgagatcgtcgccgacggtgcttcggccatctatggcgcc
gatgccgtcgcgggggtcgtcaacatcctcctccgcaaggactatgagggcgtcaccacg
agcgctcggctcggcggctccaccgacggcggcaatttccagcagcaatataatctgctc
ggcggtgccaaatggtcaggcggcggattcatggcgacctacgactatttcgacaacagc
gcgattctcgcgcgcgaccgcagctacaccgcgaccagcaaccccgcctcgaccctttat
cccagtctgaagcggcacagcctgctattgagcgggcaccaggaattgacgcccagcctt
cggctgaaagctgatgtcatctacaaacgcggcgacatgcaatcggtgcgcgggctgctc
gccgaccggccgattacgactcggggtctcgttgtcgacaatgaattcgagaccttcggc
atggcgccgacgctggaagccgaaatcggcggtgcgtggactgctaggctcaccggcttt
tacggcaccgacaagacctatggcgtcacccagaacttcaccaacgacgtcgaagctcga
tcgatccggattttcgacaatcggagcgtcagtgtcgaagcgggcatcgagggtccgctg
ttcacccttcccgggggtgacgtgcggctcgcggcaggcggcggctggcgaagcaaccgc
atcgtggcactggttgcagggcgcaacttcgcaccgacgcgcgaaaaccgcttcgcttac
ggcgaacttttcgtgccgctcgccggccctgcgcaggacctcgctttcgcgcatcgcgcg
tcgattaccgccgcactccgctgggaggattactccgactcaggcagcatcgtcacgcca
aagctcggttttgtttatgcaccagcgcctgagctcagcctcggcgtttcatgggggcgc
tccttcaagatgccgacgctcaatcagcaatatagcggctatacgcccgtgctgttgcca
gtgacgggatatggcacgctttttccgcccggcgcgacctatctctatatcggcgggccg
aaccccgacgtcggccccgagcgctcggagaatatgacgctgagcgcgaccttccagcct
tcgccgcggctgcagatcgtgacgagcctgttccggatcgattatcgcgaccgtgtcgcc
ccgcccttcggttcaccgctggggatattgaccaatcccctcttcacgagcctggtgacc
ttcaatccttccgcagcccagctcgacgcggcgatcgtccgtgcatcggacccgctcggg
aacgcaaccggcgggccctataatcccgccaacgtcatcgcgctcatcgatggtcgcgac
cgcaatatcgcatcgcaacgctatgagggggccgacctctcgcttcgctaccgcgcgcct
gtgggcggcgggcggacgctgaccgtcacggtcaatgcgacctggctcgacagccggcag
caattgctgcccggccttccggtcaccgacctcgcgggcacgatcttcaattcgccgcac
tttcgcgcacgcggaggcgcgaccttcggcgacgaacgcttcacgatcgcgtccttcgtg
aattttaccggcggggtaacagaccgccggcgcgcggtgccggcaaaggtttcgcctgtg
gccaccgtcgatctcgcgggccgcatcaagatcagcggcctcgccgagctatccgtaaac
gcgctcaatatcttcaacgcgaagcctgacaggacggcggtagcatcgcccagcgacacg
ccctttgattccaccaactattcggcgatcggccgctttttcgggctcacgatcagccgt
gactggtga
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