Sphingopyxis sp. 113P3: LH20_21540
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Entry
LH20_21540 CDS
T04069
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp03030
DNA replication
sphp03430
Mismatch repair
sphp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH20_21540
03430 Mismatch repair
LH20_21540
03440 Homologous recombination
LH20_21540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphp03032
]
LH20_21540
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_21540
Enzymes [BR:
sphp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH20_21540
DNA replication proteins [BR:
sphp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH20_21540
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH20_21540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
ALC14553
LinkDB
All DBs
Position
4360537..4361568
Genome browser
AA seq
343 aa
AA seq
DB search
MKTVKPAELERQTRLDPAVRLTLLTGPDDATMNAVAARLVALAGKEAERLDLSSSQLGQD
PSLLAAEAASMSLFAAQRVIRLEITGSGDDCVEAVAALMAAETAVNPVIATGATITAKSK
LVKLIEGSNHAVAAICYQPDRRALVGIAIAAAEEQGLKLANAEAQLLVDLVSGDQALMRR
ELEKIALYLDAARDRQRQVTAADIAALGAATHEEDVSMCINVALGGKVRELPDMLAQAAA
VGVAEIRIIRALAIRTMQLARLRAEVDAGAHPATVVSARSSGVFWKERDAVTAQLHIWDS
LRIARLMSRLLDCERALKASGTAGAVLFRKLMTDIAWQAARAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaagacggtcaagcccgctgagctcgaacgccagacccggctcgaccccgcggttcgc
ctgaccctgctgaccggtccggatgacgcgacaatgaacgctgtggcggcgcggctcgtt
gcgcttgcgggcaaggaggccgagcggctcgacctttcctcctcgcagcttgggcaggac
ccgtcgctgcttgctgccgaagcggcgtcgatgtcgctcttcgccgcccagcgcgtgatc
cggctcgagatcacgggaagcggcgacgattgcgtcgaggcggtcgcagcgctgatggct
gccgaaaccgccgtcaatccggtgatagcgactggggccacgataaccgccaagtccaaa
ctggtgaagctgatcgaagggtcgaaccatgcggtcgctgccatctgctaccagcccgac
cgccgcgcgctcgtgggcattgcgattgcggccgccgaagaacaggggctgaagcttgcc
aatgcggaggcgcagctgctcgtcgatcttgtctcgggcgatcaggcactgatgcggcgc
gagctggaaaagatcgcgctctatctcgacgctgcgcgcgatcggcagcggcaggtcacc
gccgccgatatcgccgcactgggcgctgcgacccacgaggaagatgtcagcatgtgcatc
aacgtcgcgctcggcggcaaggtgcgcgaacttccggacatgctggcacaggcggcagct
gtcggagttgccgagattcgcatcatccgtgcgctcgccatacgcacgatgcagctcgcg
cggctgcgcgcagaggttgatgcgggcgcgcaccctgcaacggtggtgtcggcgcgcagc
agcggtgtcttctggaaagagcgcgatgccgtcaccgcacagctccacatctgggattcg
ctccgcatcgctcggctgatgagccggttgctcgactgcgagcgagcgctcaaggcgtcg
ggtaccgcgggcgccgtgctgtttcgcaagttgatgaccgatatcgcctggcaggccgcg
agggcacgctaa
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