Sphingopyxis sp. 113P3: LH20_22360
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Entry
LH20_22360 CDS
T04069
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphp03032
]
LH20_22360
03036 Chromosome and associated proteins [BR:
sphp03036
]
LH20_22360
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_22360
DNA replication proteins [BR:
sphp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LH20_22360
Chromosome and associated proteins [BR:
sphp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LH20_22360
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LH20_22360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ALC14714
UniProt:
A0A0M4CZC9
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All DBs
Position
unnamed:123707..123976
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AA seq
89 aa
AA seq
DB search
MNMSELTKSVASSTGATETATKAMIAAVFDAIAASAAEGDDVAIPGFGKFTVKSRPERQG
RNPATGEAMTIKASRKVSFAAAKGLKDRL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgagcgaactgaccaagagcgttgcctcttccaccggcgcgaccgaaaccgcc
acaaaggcaatgattgctgcggtcttcgacgcgatcgccgcctcagcagcagagggcgat
gacgtcgctattcccggtttcggcaaattcaccgtcaagagccgccccgagcgtcaggga
cggaatcctgcgaccggcgaagccatgaccatcaaggcatcacggaaggtgtcgtttgcg
gctgcaaaaggactgaaggaccgcctgtag
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