Sphingopyxis sp. QXT-31: BWQ93_06565
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Entry
BWQ93_06565 CDS
T04913
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sphq
Sphingopyxis sp. QXT-31
Pathway
sphq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWQ93_06565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphq03019
]
BWQ93_06565
Messenger RNA biogenesis [BR:
sphq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BWQ93_06565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
APZ98177
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All DBs
Position
1330621..1331097
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AA seq
158 aa
AA seq
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MIDHSKLPYRPCAGVMLANRDGRIFVGQRLDTTSEAWQMPQGGIDPGEDAEMAAIRELGE
ETGVHGGLVEIIARSKEEYFYDLPDHLIGKMWGGKYRGQRQHWFLMRFMGADSDVNIHTS
HQEFRAWKWAELNEIEKLIVPFKRALYRGLVEEFGPLV
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcacagcaaacttccctatcgcccctgcgcgggcgtgatgctcgccaatcgc
gatgggcgcatcttcgtcggccaacggctcgatacgaccagcgaggcgtggcagatgccg
cagggcgggatcgaccccggcgaggatgccgagatggcggcgatccgcgagctcggcgag
gaaaccggggtgcacggcgggctggtcgagatcatcgcgcgcagcaaggaagaatatttc
tacgacctgcccgaccatctgatcggcaagatgtggggcggcaaatatcgcggccagcgc
cagcactggttcctgatgcgcttcatgggcgcggacagcgacgtcaatatccacaccagc
caccaggagtttcgcgcctggaaatgggccgagctgaacgagatcgagaaactgatcgtg
ccgttcaagcgcgcgctctaccgcggactggtcgaggaattcgggccgctggtctga
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