Sphingopyxis sp. QXT-31: BWQ93_10070
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Entry
BWQ93_10070 CDS
T04913
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sphq
Sphingopyxis sp. QXT-31
Pathway
sphq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sphq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BWQ93_10070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphq03400
]
BWQ93_10070
DNA repair and recombination proteins [BR:
sphq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BWQ93_10070
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BWQ93_10070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
DUF87
Microtub_bd
AAA_16
AAA_22
SWI2_SNF2
DUF2963
Motif
Other DBs
NCBI-ProteinID:
APZ98799
LinkDB
All DBs
Position
2096341..2098527
Genome browser
AA seq
728 aa
AA seq
DB search
MAIQIRTSLDEIDTAVDYVPHRPARPAKVEGGKRFELVSDYEPAGDQPTAIRELVSTALD
GERDQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEFKSFFPNNAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIGS
VETYSAMIFDLKKGQVADNREIIRKLVALQYKRNDQAFARGNFRVRGDSLEIFPSHYEDM
AWRISFFGDEIEEITEFDPLTGKKIANLNYVRVFANSHYVTPGPTLKQASEAIKHELTER
LKELETEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
DNALLFVDESHQTIPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLRFAEWDMMRPQTV
SVSATPGTWEMERTQGVFAEQVIRPTGLIDPPVFIKPVEEQVDDLIMEAKATAAAGYRTL
VTTLTKRMAEDLTEFLHEAGLKVRYMHSDVETLERIEIIRDLRLGVFDVLVGINLLREGL
DIPECGLVAILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRITGSMERAMRETDR
RREKQTEYNVQHGITPTTIKRNIGDIIAHVASKDGVTIDIGDDKPAHMVGHNLRAYIQDL
EKKMRDAAADLEFEEAGRLRDEIRKLEADELGLPIDQQVAPRVGRSNEGKPGTRKGRFGK
QSKTKWGR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcagattcgcacctcgctcgacgaaatcgacaccgcggtcgattatgtcccc
caccgtcccgcgcgccccgccaaggtcgagggcggcaagcgcttcgaactggtcagcgac
tatgagcccgcgggagaccagcccaccgcgatccgcgagctggtttcgaccgcgctcgat
ggcgaacgcgaccaggtgctgctcggcgtcaccggatcgggcaagaccttcaccatggcg
aaggtcatcgaggagctccagcgcccggcgctgatccttgccccgaacaagatcctcgcg
gcgcagctctacggcgagttcaagagcttttttccaaacaatgcggtcgaatatttcgtc
agctattacgactattaccagcccgaggcctatgtgccgcgcagcgacacctatatcgag
aaagagtcgagcgtaaacgaggcgatcgaccgcatgcgccactcggcgacgcgcgccttg
ctcgaacgcgacgatgtgatcatcgtcgcgtcggtgtcgtgcctttacggtatcggctcg
gtcgagacctattccgcgatgatcttcgacctcaaaaaggggcaggtcgcggacaatcgc
gagatcatccgcaagctcgtcgcgcttcagtacaaacgcaacgaccaggcgttcgcacgc
ggcaatttccgcgtccggggcgatagcctcgaaatcttcccctcgcactatgaggatatg
gcgtggcggatcagcttcttcggcgacgagatcgaggagatcaccgagttcgatccgctg
acggggaagaagatcgcgaatctcaactatgtccgcgtctttgcgaactcgcactatgtg
acgccggggccgactctcaaacaggcgagcgaggcgatcaagcatgagctgaccgaacgg
ctgaaggagctcgaaaccgagggccggctgctcgaagcccaacggctcgaacagcgcacc
aatttcgacctcgaaatgatcgccgcgacgggtagctgcgccgggatcgagaattacagc
cgcttcctgaccggtcgcctgcccggcgagccgccgccgaccctgttcgaatatctgccc
gacaacgccctgctcttcgtcgatgaaagccaccagacgatcccgcagatcggtgcgatg
tcgaagggcgatcatcgccgcaagatcacgcttgccgaatatggcttccgactgccgagc
tgcatcgacaaccggccgctgcgcttcgccgaatgggacatgatgcgcccgcagacggtc
agcgtgtcggcgaccccgggcacttgggaaatggagcgtacgcaaggcgtgttcgccgaa
caggtgatccgccccaccgggctcatcgacccgccggtgttcatcaagcccgtcgaggag
caggtcgacgacctgatcatggaggccaaggcgaccgccgccgcgggctatcgcacgctc
gtcacgacgctgaccaagcgcatggccgaggacctcaccgaattcctccacgaggcgggg
ctgaaggtccgctacatgcactcggacgtcgagacgctcgaacgtatcgagatcatccgc
gacctccgcctcggggtgttcgacgtgctcgtcggcatcaacctgctgcgcgaaggcctc
gacatccccgaatgcggcctcgtcgcgatcctcgacgccgacaaggagggcttcctgcgc
agcgaaacctcgctggtccagacgatcggccgcgccgcgcgtaacgtcgacggccgagtc
attctctacgccgaccgcatcaccggcagcatggaacgcgcgatgcgcgagaccgaccgc
cgccgcgaaaagcagaccgagtataacgtccaacacggcatcaccccgacgacgatcaag
cgcaacatcggcgacatcatcgcgcatgttgcgtcgaaggacggggtgacgatcgacatc
ggcgacgacaagccggcgcatatggtcggccacaacctccgcgcctatatccaggacctc
gaaaagaagatgcgcgacgccgccgccgacctcgaattcgaggaagccggccgcctgcgc
gacgagatccgcaagctggaagccgatgagctgggtctgcccatcgaccagcaggtcgcc
ccgcgcgtcggccgctcgaacgagggcaagcccggcacgcgcaagggccgcttcggcaag
cagagcaagaccaaatgggggcggtga
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