Sphingopyxis sp. QXT-31: BWQ93_12580
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Entry
BWQ93_12580 CDS
T04913
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphq
Sphingopyxis sp. QXT-31
Brite
KEGG Orthology (KO) [BR:
sphq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphq02000
]
BWQ93_12580
Transporters [BR:
sphq02000
]
Other transporters
Pores ion channels [TC:
1
]
BWQ93_12580
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APZ99231
LinkDB
All DBs
Position
complement(2616927..2618924)
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AA seq
665 aa
AA seq
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MKNHATRAAPLLALAFVPFAAHAEEATDATIIVTAPQLTDAAEAQIAKTPGGADVVGHED
YADKSIMSLRDTLAFSPGVYLQPRYGQEVRISIRGSGLSRGFHMRGLTLLQDGVPINLAD
DNGDFQELEPIFFDHLEVWRGANALRFGSGTLGGAVNGVTPTGRTAEGFYLRGDVGSFDS
YRGLVSAGIAGDRVDAWGAISADTSDGDRAHVKRRSFRFHGNVGMQFSDVVSNRLYVSFN
NIDQEIPGALTRAQALTTPRMANAGAVALDQARDIDSLRFQNRTRFDWGALTLDVGAFIN
AKSLYHPIFEVIDQESLDRGGYFRFDYAGDIVEATIGGELRVGDIGSKRFVNLAGKRGAV
RFNADQDARAATLYGELRVKPVERLSLIAGGIYADGERKQVINFNAAAPAQNGTVGRADF
VAFSPKFGLLFEPAADVQLYANYSRSVEFPGFNELAQIASFVALDPQRAWTAEVGTRGKT
GPLGWDLTYYRSDIKGELLQFNVGPAIPASTFNAGRTRHEGVEAAVQLDLTDWLRLRQVY
NWSNFRFRGDADYGDNRLPVVPRHVYRAELRIGTDALHVAPNLEWVPDGPFADYRNLVST
PGYALIGVTGGARIAEGIDAFVDIRNITGKKAIGDISAAITVTPTSAIYYPVEGRAISAG
LRARF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatcacgctacccgcgcggcgcccttgctcgcgctcgccttcgttccgttcgcc
gcccatgccgaagaggccaccgacgccaccatcatcgtcaccgcaccgcagctcaccgac
gccgccgaggcccagatcgcgaagacccccggcggcgccgacgtcgtcggtcatgaggat
tatgccgacaagtcgatcatgtccctgcgcgacacgctcgccttctcgcccggcgtctat
ctccagccgcgctacgggcaggaggtgcggatctcgatccgcgggtcgggtctgtcgcgc
ggtttccatatgcgcgggctgacgctgctgcaggacggggtgccgatcaacctcgccgac
gacaatggcgatttccaggagctggaaccgatcttcttcgaccatcttgaggtctggcgc
ggcgccaatgcgctgcgcttcggctcgggcaccttgggcggggcggtcaacggcgtgacc
ccgaccgggcgtaccgccgagggcttttacctgcgcggcgacgtcggcagtttcgacagc
taccgcggtctcgtctcggcgggcatcgccggcgaccgcgtcgatgcctggggcgcgatc
agcgccgacacctcggacggcgaccgcgctcatgtgaagcgtcgcagcttccgctttcac
ggcaatgtcgggatgcaattcagcgatgtcgtatcgaaccggctctatgtcagtttcaac
aacatcgatcaggagattccgggcgcactgacgcgcgcgcaggcgttgacgacgccgcgt
atggcgaacgccggtgcggtcgcgctcgatcaggctcgcgacatcgattcgctgcgcttc
cagaaccgcacgcgcttcgactggggtgcgctgacgctcgacgtcggcgcgttcatcaac
gccaagtcgctctaccatccgatcttcgaagtgatcgaccaggaaagcctcgaccgcggc
ggctacttccgcttcgactatgcgggcgatatcgtcgaggcgaccatcggcggcgaactg
cgcgtcggggacatcgggtcgaaacgcttcgtcaatctcgcgggcaagcgcggcgcggtg
cgcttcaacgcggatcaggacgcgcgcgccgcgacgctttatggcgaactgcgcgtgaag
ccggtggagaggctgtcgctgattgcgggcggcatttacgccgacggcgagcgcaagcag
gtgatcaatttcaacgctgccgcgccggcgcagaacggcacggtcgggcgcgccgacttc
gttgctttctcgcccaagttcggcttgctgttcgaacccgccgcggacgtccagctttac
gccaattacagccgctcggtcgaattcccaggcttcaacgaactggcgcagatcgcgagc
ttcgtcgcgctcgacccgcagcgggcctggaccgccgaggtcggtacgcgcgggaaaacc
ggaccgctcggctgggacctcacctattatcgcagcgatatcaagggtgagcttctgcaa
ttcaatgtcggcccggcgatcccggcctcgaccttcaacgccgggcgcacgcgccatgaa
ggcgtcgaggctgcggtgcagctcgacctgacggactggctgcggctgcggcaggtctat
aactggagcaacttccgcttccggggcgacgccgactatggcgacaatcgcctgccggtg
gtgccgaggcatgtctaccgcgccgaattgcgcatcggcaccgacgcgcttcacgtcgcg
ccgaacctcgaatgggtgcccgacggtcctttcgccgactatcgcaatctcgtctccacc
cccggctacgcgctgatcggtgtcaccggcggcgcgcggatcgctgagggcatcgatgcc
ttcgtcgatatccgcaatatcaccggcaagaaagcgatcggcgatatcagcgcggctata
acagtaacgccgacctcggcgatctattaccccgtcgagggccgcgcgatctccgccggc
ctccgcgcgcgcttctaa
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