Sphingopyxis sp. QXT-31: BWQ93_13785
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Entry
BWQ93_13785 CDS
T04913
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sphq
Sphingopyxis sp. QXT-31
Pathway
sphq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sphq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BWQ93_13785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphq03400
]
BWQ93_13785
DNA repair and recombination proteins [BR:
sphq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BWQ93_13785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
APZ99435
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All DBs
Position
2868802..2869680
Genome browser
AA seq
292 aa
AA seq
DB search
MAARAYWKGQIRLALVSIPVEIYPATKSGAAISFRQIHEPSGKPVKYEKTVPGIGAIDTD
DIVKGYETSKGNYVLLDEEEIEAVKLESKRTLELVQFVDAGEIDILYYAKPYYVVPADEL
AEEAYIVLREALSKSKKVGLGQLSVRGQEQLVGLRPCGRGLVLEVLRYADEVNKAANYFR
DVGNAKPDADLLDLAATLIDKKSGKFDASEYHNHYVDALKRVIAKKAKAKGKRVLEDVEE
PAPVSRGSNVIDLMAALKASVDGKKKAPAAEEKKPPAKKAAPAKKAPARKRA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacgagcctattggaagggacagatccgcctcgcgctcgtgtcgatccctgtc
gaaatctatccggcgaccaagtcgggcgccgcgatcagcttccgccagatccacgaaccg
agcggcaagccggtcaaatatgaaaagaccgtgcccggcatcggtgcgatcgacaccgac
gatatcgtgaaaggctatgagacctcgaagggcaattatgtcctgctcgacgaagaggag
atcgaagcggtcaaattggagagcaagcgcacgctcgaactcgtccagttcgtcgacgcg
ggcgagatcgacatcctctattatgccaagccctattatgtcgtccccgccgacgagctt
gccgaagaggcctatatcgtgttgcgcgaggccctcagcaaatcgaagaaggtcgggctc
ggccagctgtcggtgcgcgggcaggagcagctcgtcggactccgcccctgcggccgcggg
ctggtgctcgaagtgctgcgctacgccgacgaagtgaacaaggcggcgaactatttccgc
gacgtcggcaacgcaaaacccgacgccgaccttctcgacctcgccgcgaccttgatcgac
aagaagtcgggcaagttcgatgcgtcggaatatcacaaccactatgtcgatgcgctcaag
cgcgtgatcgccaagaaggcgaaagccaagggcaagcgcgtgctcgaggatgtcgaggaa
cccgcgcccgtgtcgcgcggctcgaacgtcatcgacctgatggcggcgctcaaggcctcg
gtcgacggcaagaaaaaggcccccgctgccgaggagaagaagccgcccgccaaaaaggca
gccccggcgaagaaagccccggcgcgcaaaagggcgtga
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