Sphingopyxis sp. QXT-31: BWQ93_19435
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Entry
BWQ93_19435 CDS
T04913
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sphq
Sphingopyxis sp. QXT-31
Pathway
sphq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BWQ93_19435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphq03400
]
BWQ93_19435
Enzymes [BR:
sphq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWQ93_19435
DNA repair and recombination proteins [BR:
sphq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BWQ93_19435
RecFOR pathway proteins
BWQ93_19435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
AAA_22
Sigma54_activat
AAA_14
AAA_17
AAA_2
AAA_33
AAA_18
nSTAND3
MCM
Rad17
TsaE
RNA_helicase
NTPase_1
AAA_28
Bac_DnaA
AAA_24
NB-ARC
NACHT
IstB_IS21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AQA00382
UniProt:
A0A1P8X237
LinkDB
All DBs
Position
complement(4053878..4054906)
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AA seq
342 aa
AA seq
DB search
MTEPALTTPHRTPEDADAALRPKSLAEFVGQAAARENLRIFVEAAKARGDALDHVLFFGP
PGLGKTTLAQIVARELGVGFRSTSGPVIAKAGDLAALLTNLEDGDVLFIDEIHRLSPAVE
EILYPAMEDRALDIMIGEGPSARSVRIDLPKFTLVGATTRQGLLTTPLRDRFGIPVRLNF
YTHAELEQVITRAARLLGLPIAPDGALEIARRARGTPRIAGRLLRRVRDFATVAGHTIVD
AKAADAALNRLEVDALGLDAMDRRYLTMIADIYRGGPVGVETMAAGLSEPRDTIEDVIEP
YLLQIGLIARTARGRTLNPSAWKHLGLNPPAGSQNGLFDQGK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccggccctcaccaccccgcaccgcacccccgaggacgccgacgccgcgctg
cggccgaagtcgctcgccgaattcgttgggcaggcggcggcgcgcgagaatttgcgcatc
ttcgtcgaggccgcgaaggcgcgcggcgatgcgctcgaccatgtgcttttcttcggcccg
ccggggctgggcaagacgacgctggcgcagatcgtcgcgcgcgagctcggggtcggtttc
cgctcgaccagcggcccggtgatcgccaaggccggcgacctcgccgcgctgctcaccaat
ctcgaggacggcgacgtcctgttcatcgacgagatccaccggctgtcgcccgcggtcgag
gaaatcctctatcccgcgatggaggatcgcgcgctcgacatcatgatcggcgaggggccg
tcggcacgctcggtgcgcatcgacctccccaaattcacccttgtcggcgcgacgacgcga
cagggcctgctgacgaccccgctgcgcgaccgattcggcatcccggtgcggctcaatttc
tacactcatgccgagctcgagcaggtgatcacgcgcgccgcgcggctgctagggctgccg
atcgcccccgacggtgcgctcgaaatcgcgcgccgcgcgcgcggaacgccgcgcatcgcc
gggcggctgctgcgccgggtgcgcgacttcgcgacggtcgcggggcacacgatcgtcgac
gccaaggccgccgatgcggcgctcaaccggctggaagtcgacgcgctcgggctcgatgcg
atggaccggcgctacctgacgatgatcgccgacatctatcgcggcggcccggtgggggtc
gagacgatggcggcgggactcagcgagccgcgcgacacgatcgaggacgtcatcgaaccc
tatctcctccagatcggcctcatcgcgcgcaccgcgcgcgggcgaacgctcaaccccagc
gcgtggaagcatctggggctcaatccccccgccggatcgcagaacggacttttcgaccaa
ggcaaatag
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