Sphingobium sp. RAC03: BSY17_1137
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Entry
BSY17_1137 CDS
T04461
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding family protein
KO
K03111
single-strand DNA-binding protein
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr03030
DNA replication
sphr03430
Mismatch repair
sphr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY17_1137 (ssb)
03430 Mismatch repair
BSY17_1137 (ssb)
03440 Homologous recombination
BSY17_1137 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphr03032
]
BSY17_1137 (ssb)
03400 DNA repair and recombination proteins [BR:
sphr03400
]
BSY17_1137 (ssb)
03029 Mitochondrial biogenesis [BR:
sphr03029
]
BSY17_1137 (ssb)
DNA replication proteins [BR:
sphr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BSY17_1137 (ssb)
DNA repair and recombination proteins [BR:
sphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BSY17_1137 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
BSY17_1137 (ssb)
Mitochondrial biogenesis [BR:
sphr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
BSY17_1137 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
DUF3127
Motif
Other DBs
NCBI-ProteinID:
AOF95743
LinkDB
All DBs
Position
complement(1180089..1180682)
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AA seq
197 aa
AA seq
DB search
MAGSVNKVILVGNLGADPEVKSFQNGGKVCNLRIATSESWKDRMTGEKKERTEWHTVAIF
SEGLVGVAERFLRKGSKVYIEGQLRTRKWQDQSGNDRYSTEVVLQGLGSVLTMLDGAPGG
GGQGGGYGGGGGGRAQQGVSDWSGGSSGYGGGDADDFGGGQGGGFGGGRASGGAAGGSRG
GAGSPNFDNDLDDEVPF
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtctgtcaacaaggtcattctggtcggcaatctgggcgcggacccggaggtc
aagagcttccagaatggcggcaaggtgtgcaacctgcgcatcgccacatccgaaagctgg
aaggaccggatgaccggcgaaaagaaggagcgtaccgaatggcacacggtcgcgatcttc
tccgaaggtctggtcggcgtggccgaacgcttcctgcgcaagggcagcaaagtctatatc
gagggtcagctgcgtacccgcaaatggcaggaccagtcgggtaacgaccgctattcgacc
gaagtcgtgttgcagggtctgggctcggtcctcaccatgctggacggcgcgccgggcggc
ggcggccaaggtggcggctatggcggtggcggcggtggtcgcgcgcagcagggcgtgagc
gactggagcggcggatcgagcggctatggcggcggcgatgccgacgactttggtggtggc
cagggcggcggcttcggtggcggccgcgcttcgggtggcgcagcaggcggcagccgcggc
ggcgcgggcagccccaatttcgacaacgacttggacgatgaagtcccgttctga
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