Sphingobium sp. RAC03: BSY17_1156
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Entry
BSY17_1156 CDS
T04461
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BSY17_1156 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphr03016
]
BSY17_1156 (trmU)
Enzymes [BR:
sphr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BSY17_1156 (trmU)
Transfer RNA biogenesis [BR:
sphr03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BSY17_1156 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
QueC
Arginosuc_synth
ThiI
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AOF96836
UniProt:
A0A1B3MUP2
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All DBs
Position
1198083..1199189
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AA seq
368 aa
AA seq
DB search
MQPEFQLAQPLDARRIVVAMSGGVDSSVVAALAAKTGAEVIGVTLQLYDHGAAVGRTGSC
CAGQDIRDARAVADRIGIAHYVFDYESRFRDSVIADFADEYMAGRTPIPCVKCNMGVKFT
DLFQIARDLGADCLATGHYVRRVEGPQGAELHRAADPARDQSYFLFATTQAQLDYLRFPL
GGLPKPMVREIAAELGLAVALKPDSQDICFVPDGDYAKIVRKLRPDADEGGDIVHIDGRT
LGRHKGMIHYTVGQRKGLEIGGQPDPLYVIRLDAPAKRVIVGPKAALAVSGATLSDINWL
GRDFAGPLTAKVRSMAKPVPARLVDGQLLFDALEYGVAPGQAAVLYDGDHVLGGGWIAST
QSAMAEAL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagaatttcagttagcccagccgctcgacgcgcggcggatcgtcgttgccatg
tctggcggcgtggacagtagcgtcgtcgccgcgctggccgcgaagaccggcgcggaagtc
atcggcgtgacgctccagctttatgatcatggcgcagcggtgggccgcaccggaagctgc
tgcgcgggccaagacatacgcgacgcgcgcgccgtcgccgaccgcatcggcatcgcccat
tatgtgttcgactatgaaagccgcttccgcgattcggtgatcgccgactttgccgacgaa
tatatggctgggcgcacccccatcccctgcgtgaagtgcaatatgggggtgaagttcacc
gatctgtttcagatcgcgcgcgacctgggcgccgattgcctcgccaccggccattatgtt
cgccgggtcgaggggccacagggcgcggaactgcaccgtgccgccgaccccgcgcgcgac
cagagctatttcctgttcgccacgacgcaggcacagctcgattatctgcgctttcccttg
ggcggcctgcccaagccgatggtccgtgaaatcgccgccgaactggggctggcggtagcg
ttgaagcccgacagccaggacatctgcttcgtccccgacggcgattatgcgaaaatcgtg
cgcaagctgcgccccgacgcggatgagggcggcgatatcgtccatatcgacggtcgcacg
cttggccgtcacaaaggcatgatccattacaccgtgggccagcgtaagggactggaaatc
ggcggccagcccgacccgctctacgtcatccgcctggatgcgccggccaagcgcgtgatc
gtggggccaaaggcggccctggcggtatcgggcgcgacattgagcgacatcaactggctg
ggtcgtgattttgccgggccgttgacggccaaggtgcgatcgatggcgaaacccgtgccc
gcgcggctggtggacgggcaattgctgttcgacgccctggaatatggcgtcgcgccggga
caggcggcggtgctctatgatggcgaccatgtgctgggcggcggctggattgccagcacg
cagagcgcgatggcggaggctctataa
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