Sphingobium sp. RAC03: BSY17_1479
Help
Entry
BSY17_1479 CDS
T04461
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr00061
Fatty acid biosynthesis
sphr00071
Fatty acid degradation
sphr01100
Metabolic pathways
sphr01212
Fatty acid metabolism
sphr02024
Quorum sensing
sphr04146
Peroxisome
Module
sphr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BSY17_1479
00071 Fatty acid degradation
BSY17_1479
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BSY17_1479
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY17_1479
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphr01004
]
BSY17_1479
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphr04147
]
BSY17_1479
Enzymes [BR:
sphr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BSY17_1479
Lipid biosynthesis proteins [BR:
sphr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BSY17_1479
Exosome [BR:
sphr04147
]
Exosomal proteins
Exosomal proteins of breast milk
BSY17_1479
Exosomal proteins of breast cancer cells
BSY17_1479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AOF97936
LinkDB
All DBs
Position
complement(1512460..1514238)
Genome browser
AA seq
592 aa
AA seq
DB search
MRAIEKFPNLVTMFFARASERGDAPFLWRKTDGAWQSLSWTMVAQQVASLSAALKAQGLK
PGDPVMLVSENRPEFCIADLAIMAAGCITVPTYTTNTTRDHQHILTDSGARAVIVSTAKL
AQVLMPAVVRSQADFIVGMEPLRGTQGQIACHMWDELIAAHPVDVATCAAAQTATRQDQA
CIIYTSGTGGAPRGVMQHHGAILLNAEGAGAVVAEDFGWGEEVFLSFLPLSHAYEHSGGQ
FLPMLLGGQIYYSEGLEKLASNIEETRPTIMVVVPRLFEVLRARIMKSIEKQGKFPNYLM
AQALRIAAKEQHGRKSLLDRPMKALLARTLIPKIRARFGGRLKALVSGGAPLNPDVGLFF
DAMGLTLLQGYGQTEAGPVVSCNRPRAGIAMDTVGPPLDGVEVRIAEDGEILVRGELVMH
GYWRNPAETEKVLKDGWLHTGDIGEFDAKGRIRITDRKKDLIVNDKGDNVAPQKVEGMLT
LQAEIGQAMVHGDRRPYLVGLIVPDAEWTLEWAQAKGLTLAEARADTAYMAALRAAVDRV
NSDLSVTERVRRFILADEPFTIENEEMTPSIKIRRHVIRKRYADRLDALYKG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttgagggccatcgaaaaattccccaatctggtcaccatgttcttcgcccgcgcgagcgag
aggggcgacgcgccgttcctgtggcgcaagacggacggcgcctggcaatcgttaagctgg
accatggtggcgcaacaggtcgcctccttgtccgccgcgctcaaggcgcaggggttgaaa
cccggcgatccggtaatgctggtcagcgaaaatcgcccggaattctgcatcgccgacctc
gccatcatggcggcggggtgcatcaccgtgccgacctacaccaccaatacgacgcgcgat
catcagcatatattgaccgatagcggcgcgcgcgctgtcatcgtttcgaccgcgaagctg
gcgcaggtgctgatgccggctgtcgtccggtcgcaggccgacttcatcgtcgggatggag
ccgttgcgcgggacgcaggggcagatcgcctgccatatgtgggatgagctgatcgcggct
cacccggtcgatgtcgccacttgcgccgccgcccagaccgcaacgcgccaggaccaggcc
tgcatcatctacaccagcggcaccggcggcgcgccgcgcggggtgatgcagcatcatggc
gcgatcctgctcaatgccgaaggggcaggcgcggtcgtagcggaggatttcggttggggg
gaggaggtcttcctgtccttcctgccgctgtcccacgcctatgaacatagtggcgggcaa
tttctgccgatgctgctgggcgggcagatctattattcggaagggctggaaaagctcgct
agcaatatcgaggaaacgcggccgaccatcatggtggtcgtgccccgcctgttcgaagtg
ctgcgcgcgcggatcatgaagtcgatcgaaaagcagggcaaatttcccaattatctgatg
gcccaggcgttacgcattgcggcgaaggaacagcatgggcgcaaatccctgctcgaccgg
ccgatgaaggcgctgctggcccgcaccctgattcccaagatccgcgcccggttcggcggc
cggttgaaggcgctggtatcgggcggcgcaccgctcaatcccgatgtcggcctgttcttc
gacgcgatggggctgacgttgcttcagggctatggccagaccgaggcaggaccggtggtg
agctgcaatcgcccgcgcgcgggcatcgccatggacacggttggcccgccgcttgacggg
gtagaagtgcggatcgccgaggatggcgaaattctggtccgaggcgaattggtcatgcac
ggctattggcgcaatccggcggaaacggaaaaggtgctgaaggatggctggctccacacc
ggcgacattggcgaattcgatgccaaggggcgcatccgcatcaccgatcgcaagaaagac
ctgatcgtcaacgacaagggcgacaatgtcgcgccccagaaggtcgaggggatgctgacg
ctgcaggccgagatcgggcaggcgatggtccatggcgaccggcgaccctatctggtcggg
ctgatcgtgccggatgccgaatggacgctggaatgggcgcaagccaagggtttgacgctg
gcggaggcgcgcgccgatacggcctatatggcggcgctacgtgcggcggtggaccgggtt
aatagcgacctgtcggtgaccgagcgggttcgtcgcttcatcctggccgacgaaccgttc
acgatcgagaatgaggaaatgaccccgtcgatcaagatccgccgccatgtgatccgcaaa
cgctatgccgaccggttggacgcgctttacaagggctga
DBGET
integrated database retrieval system
