Sphingobium sp. RAC03: BSY17_1705
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Entry
BSY17_1705 CDS
T04461
Name
(GenBank) putative DNA metabolism protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY17_1705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphr03400
]
BSY17_1705
Enzymes [BR:
sphr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BSY17_1705
DNA repair and recombination proteins [BR:
sphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSY17_1705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AOF96943
UniProt:
A0A1B3MV13
LinkDB
All DBs
Position
complement(1753262..1754665)
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AA seq
467 aa
AA seq
DB search
MHRVALTAPDDMDGWRSAARRLAMAGVDPADVVWQVGDSPGDLFGDAPLPPEDKSSAFSV
PRSFVSLAESAILHSGPSRFAFLYALLCRVRARPGTMEDSADPMLARVQALAKSVRRDIH
KMRAFVRFREMADADGPRFVAWFEPDHHIVRANAGFFMRRFATMHWSILTPDISIHWDGT
TLREGPGASRADAPQGDPVEALWKGYYAAIFNPARLKTGAMLSEMPKKYWKNLPEASLIP
DLIAGAQQREAAMIATAPTPPKRASNAATAWASLRAEAMACTRCPLHEPATQTVFGEGPL
AAPLMFIGEQPGDHEDLAGRPFVGPAGHLFDAALAQSGVDRAQAYVTNAVKHFKYEQRGK
RRIHQTPVAGEVQACRWWLDQERAILRPRIIVALGATAARAMLGKAVTISGTRGAAIPLE
DGAEGWVTVHPSYLLRLPDEDRRAEEQARFVADLAMIGDRLRALTAD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcgtcgccctgaccgcgcccgatgatatggacggttggcggtcggcggcgcgg
cggctggcgatggcgggcgtcgatcccgccgatgtggtgtggcaggtcggggactcgccg
ggcgacctgttcggcgacgccccgcttccccccgaagacaaaagcagcgccttttccgtt
ccgcgcagcttcgtctcgctggccgagagcgcaatcctgcacagcggcccaagccgcttc
gcctttctctacgccttgctgtgccgcgtgcgcgcgcggccgggcacgatggaggacagc
gccgacccgatgctggcgcgggtgcaggcgctcgccaagtcggtgcggcgcgacattcac
aagatgcgcgccttcgtccgcttccgcgaaatggcggatgccgacggcccgcgcttcgtc
gcctggttcgagccggaccatcatatcgtgcgcgccaatgccggtttcttcatgcgccgc
ttcgccacgatgcactggtcgatcctgacgcccgacatcagcatccattgggacggaacg
acattgcgcgaaggccccggcgccagccgcgccgacgcgccgcagggcgacccggtcgag
gcgctgtggaagggctattatgccgcgatcttcaaccccgcccggctcaagaccggcgcg
atgctgtcggaaatgcccaaaaaatactggaagaacctgcccgaagcatcgctcatccct
gacctgatcgccggagcgcaacagcgcgaggcggcgatgatcgccaccgccccgaccccg
cccaagcgcgcaagcaatgccgcgaccgcctgggccagcctgcgcgccgaggccatggcc
tgcacccgctgtccgctccatgaacccgccacgcagacggtgttcggcgaaggcccgctg
gccgcgccgctgatgttcatcggcgaacagccgggcgatcatgaggatctggccggtcgt
ccctttgtcggtccggccgggcacttgttcgacgcggcgctggcgcagtcgggcgtcgat
cgtgcccaggcctatgtcaccaatgcggtcaaacatttcaaatatgaacagcgcggcaag
cggcgcatccaccagaccccggtggcgggcgaggtccaggcctgccgctggtggctggac
caggagcgcgcaatcctgcggccgcgcatcatcgtcgcgctgggcgcgaccgccgcgcgc
gcgatgctgggcaaggcagtgaccatcagcgggacgcgcggtgccgccatcccgctggaa
gacggcgcggaaggctgggtgacggtccaccccagctatttgttgcgcctgcccgacgaa
gaccggcgggcggaagagcaagcgcgcttcgtcgccgacctggcgatgatcggcgatcgg
ctccgcgctctgaccgccgactaa
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