Sphingobium sp. RAC03: BSY17_2017
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Entry
BSY17_2017 CDS
T04461
Name
(GenBank) bacterial regulatory helix-turn-helix, lysR family protein
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
sphr
Sphingobium sp. RAC03
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphr03000
]
BSY17_2017
Transcription factors [BR:
sphr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BSY17_2017
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
MarR
Motif
Other DBs
NCBI-ProteinID:
AOF96204
UniProt:
A0A1B3MSX2
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Position
2066527..2067759
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AA seq
410 aa
AA seq
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MATDPFDLNLRHLRALLAIREHGSITAAADVVSLSQPALTQGLAKLERQFGYTFFERRSG
GMVPTPMGEIVIERARAALDHLSQAAKGLSGVFHYPERLMTMTQLRAFLALAEAGSFAAA
AHGSTLSQTAVHRAVGDLEQMIGGKLVERRGRAVWLNPAGKRLARGTRLAVAEIVAALAD
IGRDSGSGSELIAFGALPLARPYLVPAAMARMARSDPRAAFKVLEGSWRELVEPLRDGVI
DMVVGALRPFEIADLYQLPLSEDRLVIAAGSQHPLAKVDKPTMEQLASYPWIVAPANSPL
REQWEKLFGEGKVPATPVECGSVMIIGRLLTEGDFLTLLSPDQVALQIRSGLLTQVGPPL
EGSKRVVGITTRRSWRPTATQRRFLDMLSEAAKGERVAGAPPDLRESGWV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgatccattcgacctcaatttgcgccacctgcgcgcgctgctggcgatccgc
gaacatggcagcatcaccgccgccgccgatgtggtcagcctgtcgcaaccggcgctgacg
caggggctggccaagctggagcggcagttcggctacaccttttttgagcgtcggtcgggc
gggatggtgccaacgcccatgggcgagatcgtgatcgagcgggcgcgcgcggcgctcgat
catctgtcgcaggcggccaagggcttgtcgggcgtgttccattatcctgagcggctaatg
acgatgacgcagttgcgcgcctttctggcgttggcggaggcagggagtttcgcggcggcg
gcgcatggtagcactctgtcgcagacggcggtgcatcgcgcggtcggcgacctggagcag
atgatcggcgggaagctggtcgaacggcgggggcgggcggtgtggctcaatccggcgggg
aaaaggctggcgcgcgggacaaggctggcggtggcggagatcgtcgcggcgctggcggac
atcgggcgcgatagcgggagcgggagcgagctgatcgcgttcggggcgcttccattggcg
cggccttatctggtccccgccgccatggcgcggatggcgcggagcgatccgcgcgcggcg
ttcaaggtgctggagggaagctggcgcgagctggtggagccgctgcgcgacggagtgatc
gacatggtggtcggcgcgttgcggccgttcgagattgctgatctttatcagttgcccttg
tcggaggatcgactggtgattgcggcggggagccagcatccgctggccaaggtggacaag
ccgacgatggagcaactggccagctatccctggatcgtcgcgcctgccaattcgccgttg
cgcgaacagtgggaaaagctgttcggggaaggcaaggtgccagcgacgccggtcgagtgc
gggtcggtgatgatcatcgggcggttgctgacggagggggatttcctgacgctgctgtcg
cccgatcaggtggcgctccagatccgcagcgggctgctgacgcaggtcgggccgccgctg
gaaggcagcaagcgcgtggtggggatcacgacgcggcgcagttggcgccccacagcgacc
cagcgccgctttctcgacatgctgagcgaggcggccaagggcgagcgcgtggcaggcgcg
ccgccggacttgcgggaatcgggctgggtgtga
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