Sphingobium sp. RAC03: BSY17_281
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Entry
BSY17_281 CDS
T04461
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr00550
Peptidoglycan biosynthesis
sphr01100
Metabolic pathways
sphr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BSY17_281 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BSY17_281 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphr01011
]
BSY17_281 (mrdA)
Enzymes [BR:
sphr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BSY17_281 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sphr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BSY17_281 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AOF98359
UniProt:
A0A1B3MZ70
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All DBs
Position
290277..292316
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AA seq
679 aa
AA seq
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MKFPLLKPKSVTEASQTFTFSRRTMVLGAIQGGIGAMLAARMAWISVAENEKYAMLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPQRVVDAEGTIRHLAQLLSLESDEVE
RIREELDKSARFRPVQVSDKLTYEQYAAVSVRLPDLPGVAPSQGFSRYYPAGSTVGHLLG
YVGPATAEDYKERRDPLLITPGFKVGKDGLEKAFDQHLTGKPGAKRVEVTARGKIVRELT
TRPDMPGNPIKLTIDAGLQEYAGRRLATQSGSVVVIDCANGDVLAMASMPSFDPNSFSDG
ISQLEWAMLSQDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGVGPQETVGCAGAIRVG
NTLFHCHKRRGHGAVNMRTAIAQSCDIYFYQMAQRVGMDRIAEMARRCGMGQRFDLPFPS
QSYGTVPDPAWKEKKYDQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGKQLMPNFL
HGAKRPAPASVGASDEHLAVIRDAMSAVVNGGGTGGAARMAIPDVLIAGKTGTAQVRRIT
MAERAGGVRRDASLAFKLRDHALFQGFAPFDNPRYAVACIIEHGGHMIRNEDAPMIASDT
LSYLFDPKKATEKLETLEKGWGGTPTERQARQMAAFRLARAIERGEVPPPVADNGSNAAD
ADNGAVAAPSPVSNESDAP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcccctgctcaagcccaagagcgtcaccgaagccagccagaccttcaccttt
tcgcgacggacgatggtgctgggggcgatccagggtggcatcggcgcgatgctggcggcg
cgcatggcctggatcagcgtcgcggaaaatgaaaaatatgcgatgctgtcggaaagcaat
cgcgtcaatctgacgctcattccgccgcgtcggggctggatcatagaccgcaacggtcgc
ccgcttgccaacaaccgcaccgattttcgtgtcgatctcatcccgcaacgggtggtcgat
gccgaaggcacgatccgccacctggcccaattgctcagcctggaatcggacgaggtcgag
cgtattcgcgaggaactggacaagtcggcgcgtttccgccccgtccaggtatccgacaag
ttgacctacgagcaatatgccgcggtcagcgtccgcctgcccgacttgcccggcgtcgcg
cccagccagggtttttcgcgctattatccggccggctccactgtcggtcatctgctgggc
tatgtcggtcccgcgacggcggaggattataaggaacggcgcgatccgctgctgatcaca
ccgggattcaaggtcggcaaagacgggctggaaaaggcgttcgaccagcatctgaccggt
aagcccggtgccaagcgggtggaagtgaccgcgcgtggcaagatcgtgcgagaactgacc
acccgccccgacatgccgggcaatccgatcaaactgacgatcgatgcaggcttgcaggaa
tatgcgggccgtcgtctcgcgacccaaagcgggtcggtggtcgtgatcgactgcgccaat
ggcgacgtgctggcgatggcatcgatgcccagtttcgatcccaacagcttttccgacggc
atcagccagttggaatgggcgatgctgtcgcaggacgaccatgtgccgctgcgcaacaag
acgttgcagggtctctatcccccaggatcgaccgtcaagcctatggtggcgctagcgctg
ctggaggccggcgtcgggccgcaggagacggtagggtgcgccggtgccatcagggtgggc
aacacgctattccactgccacaagcggcgcggccatggcgcggtcaacatgcgcaccgcc
atcgcgcaaagctgcgatatctatttctatcaaatggcccagcgcgtcggcatggaccgc
attgccgaaatggcgcggcggtgcggcatgggccagcgcttcgacctgcctttccccagc
cagagctatggcaccgtgccggacccggcgtggaaggaaaagaaatatgaccagaaatgg
caggtctacgacacggtgaatgccaccatcggtcagggctacatgctcatcaacccgctc
cagatggcagtgatggcggcacgactggcgacgggcaaacagttgatgcccaacttcctg
catggcgcgaaacgccctgcccccgcctctgtgggcgcttcggatgagcatctcgcggtc
atccgcgacgcgatgagcgccgtggtcaatggcggcggtacaggcggcgcggcgcggatg
gccattcctgacgtgctgatcgcgggcaagaccggcaccgcacaggtacgccgcatcacc
atggccgagcgcgcaggcggggtccggcgcgacgcatcgcttgccttcaagctgcgcgac
catgccctgttccagggcttcgcgccgttcgacaatccgcgctatgccgtcgcctgcatc
atcgaacatggcggccatatgatccgcaatgaggatgcgccgatgatcgccagcgacacc
ctctcttatttgttcgaccccaagaaggcgacggagaagctggaaacgctggaaaaaggc
tggggcgggacgccgaccgaacggcaggcgcggcagatggcggcttttcgcttggcgcgc
gcgatcgaacgcggcgaagtgcccccgccggtcgccgacaatggcagcaatgctgccgat
gcggataatggtgccgtcgccgcaccctcacccgtcagcaatgagagcgatgcaccatga
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