Sphingobium sp. RAC03: BSY17_2909
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Entry
BSY17_2909 CDS
T04461
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sphr
Sphingobium sp. RAC03
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphr03400
]
BSY17_2909
Enzymes [BR:
sphr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BSY17_2909
DNA repair and recombination proteins [BR:
sphr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BSY17_2909
Prokaryotic type
BSY17_2909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOF98227
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Position
2979495..2980979
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AA seq
494 aa
AA seq
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MDRIAHGLICDGPLVHNMPDRVVGTRPGAAHCPIMSSNAPVLLWLRQDLRLSDQAALAAA
VQEGPVIPVYILDDDTPRTWAMGGASRWWLHHSLSRLDERLREKGARLILRRGASAEILA
QLAQETGARRVHALHHYEPWWRNAEKAVAKTLDLCLHDGGLLLPPGAVRTGAGGIYRIYT
PFSRAVMDHMPPPTPTRAPAAIPSPDQWPASDALDDWALLPTKPDWAGGFTEDWTPGEAG
ARAHLTSFLDEVGDYPVARNLPSVEGSSRLSAHLHFGEISPATVWHRVASSGQDATIYLK
ELIWRDYAHVQICQMPTYGSENARSDFDALQWRDLRSAGSDFTAWKTGRTGYPIVDAGMR
QLWATGWMHNRVRMIAASFLIKHLLIDWRHGARWFWDTLVDASYANNSVNWQWVAGSGVD
ANLFTRIMAPLSQSEKFDAAAYIRRWVPELADLNDRFIHDPDAHGARPAAYPPKIIDHRE
GRERALAAYRHAKG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaatcgcgcatggcctgatttgcgacgggccgttggtccacaatatgcccgat
agggtggttggaacccggcccggtgccgcgcattgccccatcatgtccagcaacgccccc
gtcctcctctggctccgccaggatctgcgcctgtccgatcaggctgcgctcgccgctgcc
gtgcaggaggggccggtcatcccggtctatatattggacgatgacacgccgcgcacctgg
gcgatgggcggcgcgtcgcgctggtggctgcaccacagcctaagccgcctggacgagcgg
ctgcgcgagaagggggcgcgtctcatccttcggcgcggggcgtcggctgaaatcctcgca
cagttggcgcaggaaacaggcgcgcgccgtgtccatgccttgcaccattatgaaccctgg
tggcgcaacgcggaaaaggcggtggccaagacactcgatctttgccttcacgacggcggt
ctgctgttgccgccgggcgcggtgcggaccggggcagggggcatctatcgcatctacacg
cccttttcccgcgcggtgatggaccatatgccaccgcccacgccgacccgcgcgcctgcg
gccatcccgtccccggatcaatggcctgccagcgacgcgctggatgactgggccttgctg
cctaccaagcccgattgggcgggcggcttcaccgaagactggacgcccggcgaagcaggc
gcgcgcgcgcacctcactagttttctcgatgaagttggcgactatccggtcgcgcgcaac
ctgccctcggtcgaaggctcctcgcgcctgtcggcgcatcttcatttcggcgaaatctcg
cccgctaccgtctggcaccgcgtcgcatcttcaggacaagatgcaactatctacctcaag
gaattgatctggcgcgattatgcccatgtgcagatttgccagatgccgacctatggctcg
gaaaatgcccggtccgatttcgatgccttgcaatggcgcgatctgcgcagcgccgggtcg
gactttaccgcttggaagaccgggcgcaccggctatccgatcgtggatgcagggatgcgc
cagctttgggcgaccggctggatgcataaccgcgtccgcatgatcgccgctagcttcctc
atcaaacatctgttgatcgactggcgccacggcgcacgctggttctgggacacgctcgtc
gatgccagctacgccaataatagcgtcaattggcaatgggtggcgggcagcggcgttgac
gccaatctgttcacccgcatcatggccccgctcagccagtcggaaaaattcgacgccgcc
gcctatatccgccgttgggtgcccgaactggccgatctcaacgacagattcattcacgac
cctgacgcccatggcgcgcgccccgccgcttatccacccaagatcatcgaccatcgcgaa
ggccgcgagcgcgccttagcggcctatcgccacgcaaaggggtga
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