Sphingobium sp. RAC03: BSY17_3128
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Entry
BSY17_3128 CDS
T04461
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BSY17_3128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphr03400
]
BSY17_3128
DNA repair and recombination proteins [BR:
sphr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BSY17_3128
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Motif
Pfam:
Ku
Tom22
Motif
Other DBs
NCBI-ProteinID:
AOF94939
UniProt:
A0A1B3MPE5
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All DBs
Position
pBSY17_1:14866..15753
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AA seq
295 aa
AA seq
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MAARPYWKGQIRLALVSIPVEIYSATRSGATIAFNQIHEPSGKRIKYEKVVPGIGPIDLD
DIVKGFEYAKGEYVLLDEKDIEGVKLESKKTLELTQFVDAHDIDMIYFEKPYYVVPADDL
AEEAFIVLREALRRSRKVGLGQLAMRGREYVVSIKACGRGMVMETLRYADEVNKAASYFR
EIGDDEPDDELLELATTLIDKKTGKFDANDFHDRYVDALKELIEHKKKGKTLNIDSDDDA
SADPRGSNVVDLMAALKKSIGPASKAKTTAKKPAGKAAAKSGAKSAGKTSAKKRA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgaccctattggaaaggccagatccgactcgcgcttgtgtccatccctgtc
gaaatctattccgcgaccagaagtggcgcgacgatcgccttcaaccagatccacgagcca
tcgggcaagcggatcaaatatgaaaaggtcgtgcccggcatcgggccgatcgatctcgac
gacatcgtcaaaggctttgaatatgccaagggcgaatatgtgctgttggacgagaaggac
atcgaaggcgtcaagctggagagcaagaagacgcttgagttgacccagtttgtcgatgca
cacgacatcgacatgatctatttcgaaaagccctattatgtcgtgcccgccgacgacctg
gcggaggaagccttcatcgtcctgcgggaagcgctgcggcgcagtcggaaggttggcctt
ggccaactggcgatgcgtggccgggaatatgtcgtcagcattaaggcgtgcgggcgcggc
atggtgatggagacgttgcgctacgccgatgaagtcaacaaggccgccagctatttccgc
gagattggcgatgacgagccggacgatgaattgctcgaactcgccacgaccttgatcgac
aagaaaacaggcaaattcgacgcgaacgattttcacgatcgctatgtcgatgcgttgaaa
gagctgatcgagcataagaagaaggggaagacgctcaacatcgatagcgatgatgacgcc
agcgccgatccacgcggcagcaatgtcgtggatcttatggcggcgctcaagaaatccata
ggcccggcgagcaaggccaagacgaccgcgaagaaaccagcgggcaaggcagcggccaaa
agcggcgcgaagtcggcaggcaaaacatccgccaagaagcgggcatga
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