Sphingobium sp. RAC03: BSY17_317
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Entry
BSY17_317 CDS
T04461
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr00061
Fatty acid biosynthesis
sphr00071
Fatty acid degradation
sphr01100
Metabolic pathways
sphr01212
Fatty acid metabolism
sphr02024
Quorum sensing
sphr04146
Peroxisome
Module
sphr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BSY17_317
00071 Fatty acid degradation
BSY17_317
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BSY17_317
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY17_317
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphr01004
]
BSY17_317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphr04147
]
BSY17_317
Enzymes [BR:
sphr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BSY17_317
Lipid biosynthesis proteins [BR:
sphr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BSY17_317
Exosome [BR:
sphr04147
]
Exosomal proteins
Exosomal proteins of breast milk
BSY17_317
Exosomal proteins of breast cancer cells
BSY17_317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AOF97220
UniProt:
A0A1B3MVU8
LinkDB
All DBs
Position
complement(323729..325429)
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AA seq
566 aa
AA seq
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MENIEKLWRENYRHPALWDQTFPPLSMGDMVTDSALAHPDAIMIDFMGRKFTYAEVFGQI
KRIACGLQAMGVQKGDRVGLYLPNTPHYVAAYYGALMAGAIVVNFSPLYTAAELEHQVED
SGTKILFTLSAKALLPTALKVLDHSSLEKLVVGSVAEMLSPVKSLLFRWFKAAETAALPH
DPRVLRYDKLIANPGACTVADINPEQDIALLQYTGGTTGTPKGAMLTHQNLTANARQAQV
IDPHANEPDRIIAVLPFFHVFANTCTLNRTVLNGGEMVMLPRFDAAQVLAAVQRVKATSL
PGVPTMFQALLDHPAIRNIDFSSLRACISGGAPLPLEVRQRFEEATGAKLIEGYGLTETS
PIVCTNPYEGLNKTGTVGQPVPGTRVKIVDREDPTKPPPPGEPGELLFAGPQVMKGYWNR
PDADAEVFMGDFIRTGDVGEIDEDGYVRIVDRLKDMISVGGFKVFPSQVESVLYHHPAVK
EALVIGVPDHYRGEQPKAFVTLNDGFDIDDEALKAWLNPQLGKHERVKAVEVRLTLPKTL
VGKLSRKELVAEERAKAAELATGSGA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggagaacatagaaaagctctggagagagaattaccgccaccccgctttgtgggaccag
accttcccgccattatcgatgggggacatggtcaccgacagcgcgctggcccatcccgac
gccatcatgattgatttcatgggccgaaaattcacctatgcggaggtgttcggccagatc
aagcgcatcgcctgcggcctgcaggcgatgggggtgcaaaagggcgaccgggtcggactc
tatctgcccaacaccccccattatgtcgcggcctattatggcgcgctgatggccggtgcg
atcgtcgtcaatttctccccgctctacaccgccgctgaactcgaacatcaggtcgaagat
agcgggaccaagatcctcttcactttgtcggccaaggcgctgctgccgaccgcgctcaag
gtgctggaccatagcagcctcgaaaagctggtggttggttcggtcgccgagatgctctcg
ccggtcaaatccctgctgttccgctggttcaaggcggcggaaacggctgccctgccgcat
gatccccgcgtgctgcgctatgacaagctcatcgccaatccgggtgcctgtaccgtggcg
gacatcaacccggagcaggacatcgccctgctgcaatataccggcggcacgaccggcacg
cccaagggcgcgatgctgacgcaccaaaatctgaccgccaatgcgcgccaggcgcaggtg
atcgacccgcacgccaacgagccggatcgcatcatcgcggtgctgccctttttccatgtc
ttcgccaatacctgtaccttgaaccgtacagtgctgaacggtggcgagatggtgatgctg
ccgcgcttcgatgcggcgcaggtgctggccgccgtacaaagggtcaaggcgacatcgctg
cccggcgtgccgacgatgttccaggcgctgctcgatcatcccgcgatccgcaacatcgac
ttttcctcgctccgcgcctgtatttcgggcggtgcgccgctgccgctcgaagtgcggcaa
cgctttgaggaagcgaccggggccaagctgatcgaaggctatggcctgaccgaaaccagc
ccgatcgtctgtaccaacccctatgaggggctgaacaagaccggcacggtcggacagccg
gtgccgggcacgcgggtcaagatcgtcgatcgcgaagacccgaccaagccgccaccgccg
ggcgagccgggcgaattgctgttcgccgggccgcaggtgatgaaaggctattggaaccgc
cccgatgccgacgccgaagtgttcatgggcgacttcatccgcaccggcgatgtcggcgaa
atcgacgaggacggctatgtccgcatcgttgaccggttgaaggacatgatctcggtcggc
gggttcaaagtcttccccagccaggtggaatcggtcctctatcaccaccccgccgtcaag
gaggcactggtgatcggcgtgcccgaccattatcgcggcgaacagcccaaggccttcgtc
accctcaatgacgggttcgatatcgatgacgaagcgctcaaggcctggctcaacccgcaa
ctgggcaagcatgaacgggtgaaggccgtcgaagtgcggctgaccctgcccaagacgctg
gtgggcaaattgtcgcgcaaggaactggttgccgaagaacgggcgaaggcggctgaattg
gcgactggaagcggcgcctga
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