Sphingobium sp. RAC03: BSY17_63
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Entry
BSY17_63 CDS
T04461
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY17_63 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphr03400
]
BSY17_63 (xth)
Enzymes [BR:
sphr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BSY17_63 (xth)
DNA repair and recombination proteins [BR:
sphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BSY17_63 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AOF97844
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All DBs
Position
complement(69985..70788)
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AA seq
267 aa
AA seq
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MKIATYNVNGVNGRLPVLLRWLEEAAPDIVVLQELKAPQEKFPQSAIRDLGYQSIWQGQK
SWNGVAILSRVGEIHETRRGLPGDPDAAQSRYIEAAVNGILIGGLYLPNGNPRPGPKFDY
KLAWFDRLIEHAAGLLESGLPVLLAGDFNVMPTERDVYKPERWLDDALFAPEVRDAFFRL
TGQGWTDALRTIHPDETIYTFWDYFRNAYGRNAGLRIDHLLLSPALADRLMDAQVDADVR
GWDKTSDHAPVWISLGGVDKFRSVIEL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctacaatgtgaatggggtcaacggccgcttgcccgtcctgttgcgg
tggcttgaagaagccgcgccggacattgtcgttctccaggaattgaaggcgccgcaggaa
aaatttccacaaagcgctatccgcgatctgggctaccagtcgatctggcaaggccagaag
agctggaatggcgtcgctatcctgagccgcgtcggcgaaattcatgaaacccggcgcggc
ctccccggtgaccccgatgctgcgcagagccgctatatcgaagcggcggtcaacggcatc
cttataggcggtctctatcttcccaatggcaacccccggcctggccccaagttcgactat
aagctcgcctggttcgatcgattgatcgagcatgcagcagggctgctcgagtccggtctg
cccgtcctgctggcaggcgacttcaacgtcatgccgaccgaacgcgacgtctacaaaccc
gagcgctggctggatgatgcattgttcgcccccgaggtgcgtgacgcttttttccggctg
acggggcaaggctggaccgacgccctacggacaatccatcccgacgagacgatatacacc
ttctgggattatttccggaatgcctatggccgtaacgcaggtttgcgcatcgatcacctg
ctgcttagccccgctctcgccgaccgtttgatggacgcgcaggtggatgcagatgtgcgt
gggtgggataagaccagtgatcatgcgcccgtctggatctctctaggcggcgtggacaaa
ttcaggtcagtgatcgagctttga
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