Sphingobium sp. RAC03: BSY17_844
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Entry
BSY17_844 CDS
T04461
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr02020
Two-component system
sphr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSY17_844
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSY17_844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphr03021
]
BSY17_844
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sphr02035
]
BSY17_844
Transcription machinery [BR:
sphr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSY17_844
Bacterial motility proteins [BR:
sphr02035
]
Flagellar system
Flagellar assembly proteins
Stator
BSY17_844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AOF97223
LinkDB
All DBs
Position
complement(872023..872751)
Genome browser
AA seq
242 aa
AA seq
DB search
MYMNKIAAGAHTYAKPGENSPERLARQYMPLVRKIAWHVHGRVSSAIEVEDLLQIGMLAL
VEAANSFEDRGFGFAAYAQLRVRGAMIDHLRRQATICRSAMAKRKQLAACRNGLEQTLGR
LPTEAEMSAEMGLDPSDYRELADSVEMVQHTSMDEVYSDQSMWFADVEDRADDVMERESL
KKALAACIGELPQREALVLQLYFVEELNLEEIGHTLDIGAARVCQIKKAALDKLREKLRD
WD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgaacaagatcgcggccggcgcccatacttacgcgaagcccggcgagaacagc
ccggagcggctcgcccgccaatatatgccgctggtgcgcaagatcgcctggcatgtccat
ggccgcgtttcgagcgcgatcgaggtggaggatctgctccagatcggcatgctcgcgctg
gtcgaggccgccaacagtttcgaggatcgcggcttcggcttcgccgcctatgcccagttg
cgcgtgcgcggcgcgatgatcgaccatctgcggcggcaggcgaccatctgccgctctgcc
atggccaagcgcaagcaactcgccgcctgccgcaatggcttggaacagacgcttggacgg
ctaccgaccgaagcggaaatgtccgccgaaatgggccttgatccgtccgactatcgcgaa
ctcgccgatagcgtcgaaatggtgcagcatactagcatggacgaggtctattcggaccag
tccatgtggttcgccgatgtcgaggaccgcgccgacgacgtgatggagcgcgaatcgctt
aagaaggcgctcgccgcctgtatcggcgaactgccgcagcgcgaagcgctggtgctgcaa
ctctattttgtcgaggaactcaacctggaggaaatcggccacacgctggacatcggcgcg
gcgcgcgtttgccagattaagaaagccgcgctcgacaaactccgcgagaaactgcgcgac
tgggactga
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