Sphingosinicella sp. BN140058: ETR14_08495
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Entry
ETR14_08495 CDS
T05826
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphs
Sphingosinicella sp. BN140058
Brite
KEGG Orthology (KO) [BR:
sphs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphs03032
]
ETR14_08495
03400 DNA repair and recombination proteins [BR:
sphs03400
]
ETR14_08495
Enzymes [BR:
sphs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ETR14_08495
DNA replication proteins [BR:
sphs03032
]
Prokaryotic type
DNA Topoisomerases
ETR14_08495
DNA repair and recombination proteins [BR:
sphs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ETR14_08495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7184
Motif
Other DBs
NCBI-ProteinID:
QAY76530
UniProt:
A0A4P6FJ16
LinkDB
All DBs
Position
1878189..1879289
Genome browser
AA seq
366 aa
AA seq
DB search
MIRYVDDSAPGITRKRQGRYWQYFAADGSRITDREEIDRLNGVGMPPAYEKCWFCPDPVG
HIQAVGWDARGRKQYRYHPLFREQQETKKYERLARFGEALPKLRQRLEEDLTGKPTAKET
VLAAVVRLIDETRMRVGNEEYAKENKSFGATTLRNRHAKVERGKLKISYTGKHGIKRTVT
ITDRNLLRIAKKTQDLPGQNLFEYVTGEGDVCAVTSSDVNAYIKEAMGEDFTAKDFRTWG
ASTIAFEEMIRRVDEKGSVKLKSVMEPVAEALGNTPAISRKSYVHPALIEAAKDAGAIGE
RKLPRSSKYLSAAERGLIEFLDALPEEAAKVEAKVAKRARSKGKSKAAAEAEIAAETSKK
VKAEAA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctacgtcgacgacagcgcgcccggcatcacccgcaagcgccagggccgctac
tggcaatatttcgcggccgacggcagccggatcaccgaccgggaggagatcgatcgcctg
aacggcgtcggcatgccgccggcctatgagaaatgctggttctgcccggatcccgtcggg
catattcaggcggtcggatgggacgcgcgcggccgcaagcaatatcgctaccacccgctg
ttccgcgagcagcaggagaccaaaaaatacgagcgtctcgcccgcttcggcgaggcgctg
ccaaagctcaggcagcggctcgaggaagacctgaccggcaagccgaccgcgaaggagacg
gtgctcgccgccgtggtccgcctcatcgacgaaactcggatgcgggtgggcaatgaggaa
tatgccaaggagaacaagagcttcggcgccaccaccttgcgcaaccgccatgccaaggtg
gaacgcggcaagctcaagatcagctataccggcaagcacggcatcaaacgaaccgtgacg
atcaccgatcgcaacctgctccgcatcgccaagaagacgcaggatctgccggggcagaat
ttattcgaatatgtcaccggcgagggcgatgtctgcgcggtcacgtcgagcgacgtcaac
gcctacatcaaggaggcgatgggcgaggacttcaccgccaaggatttccgcacctggggc
gccagcacgattgccttcgaggagatgatccgccgcgtcgacgagaagggcagcgtcaag
ctgaagagcgtgatggaaccggtcgccgaggcactcggcaatactccggcgatcagccgc
aaatcctatgtccacccggcgctgatcgaggcggccaaggatgccggcgcgatcggcgag
cgcaagctgccccgatcaagcaaatacctgtccgccgccgagcgcgggctgatcgagttc
ctcgacgctctgcccgaagaggccgccaaggtcgaagcgaaggtggccaagcgcgcccga
tccaagggcaagagcaaggcggcggccgaggccgaaatcgccgccgagaccagcaagaag
gtaaaggccgaggcggcgtag
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