Sphingosinicella sp. BN140058: ETR14_17670
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Entry
ETR14_17670 CDS
T05826
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sphs
Sphingosinicella sp. BN140058
Pathway
sphs03420
Nucleotide excision repair
sphs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETR14_17670
03430 Mismatch repair
ETR14_17670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphs03400
]
ETR14_17670
Enzymes [BR:
sphs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETR14_17670
DNA repair and recombination proteins [BR:
sphs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETR14_17670
MMR (mismatch excision repair)
Other MMR factors
ETR14_17670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QAY78150
UniProt:
A0A4P6FMZ0
LinkDB
All DBs
Position
complement(3947704..3949563)
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AA seq
619 aa
AA seq
DB search
MDVVIAPDNVDLDRGADEVIAQCLDLNAPQSFFLFAGAGSGKTGSLVRALKSVQTRFGRE
LRFSGRRAAVITYTNKARDEIERRLEFDPIIQVSTIHSFAWQLIGGLDRDIREWLRGNLA
LEIAHLRMAEAKGRAGKASETRKVKLASKTRRLERLDEVRRFNYSPTGENRGQAALSHGE
VLKIATEFLAKPAMRHILVGEHPILLIDESQDTNGLLLDALFAVQAAHRDVFVLGLFGDM
MQRIYSDGRKGLGEDLPPDWAKPKKQLNHRCPKRVVALLNKIRGPVDAQVQTPRTTAIEG
LVRLYVLPANTADKAGAEAVIAARMAELTNDAAWHEASGSKRLILEHKMAARRLGFYELY
APLYAVDSFKTGLREGTLPILRFFTHDVARLVQAQRADDRFAVARLLRDSSPLLASIEDG
EVADMRTTLAAVGRALGELMDLFENSADPPLGDVLRTIAGSRLLSIPESLQPSALRKTAS
QPADAHDEEADDERTAAIDQFLQARFSQVPGYDDYVSGRAAFDTHQGVKGLEFPRVMVIM
DDLEAGGFTFSYEKLLGVNGAANEVTQRLFYVTCSRAEESLALVAYSADPEAVRRNVIAS
GWLEPREVEVMNPSVDNSR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggtgattgcgcctgacaacgtcgatctggatagaggcgccgacgaggtgatc
gcccagtgcctggacctgaatgcgccgcagagcttttttctgttcgccggcgcggggtcg
ggcaagaccggctccctggttcgagcccttaagtccgtccagactcgttttggtcgggag
cttcgcttctccggacggcgggcggcggtgatcacctacaccaacaaggcccgcgacgag
atcgagcggcgtttggaattcgatccgatcattcaggtcagcaccatccacagcttcgcc
tggcagctcatcggtggactggaccgcgacattcgcgaatggcttcgcggcaacctcgcg
ctggagatcgcgcaccttaggatggctgaggccaagggccgggccggcaaggcctcggaa
acgagaaaggtgaagctcgctagcaagacacggcggctagagcgcttggacgaggtgcgt
cgcttcaactacagcccgacaggcgagaatcgcggacaagccgcgctcagccacggtgag
gtgctgaagatcgcaaccgaattcctcgcgaagccggccatgcgtcacattctagtcggc
gaacatccaatcctactgatcgacgagagccaggacaccaatggtctgctactcgacgcg
ctctttgccgtccaggccgcgcacagggacgtcttcgtcctgggccttttcggcgacatg
atgcagcggatttacagcgatggacgcaaggggcttggtgaggaccttcctccagactgg
gccaagccgaaaaagcagctaaatcatcgctgtcccaagcgggtcgttgccctgctcaac
aagatccgcggtccggtcgatgcacaggtccagacaccccgcacgacggcgatcgagggt
ttggtgcggctgtacgtgctgccggcgaataccgccgacaaggccggagccgaagcggtg
atcgcggcgcgcatggccgagctgaccaatgacgcggcatggcacgaggcgtcgggatcc
aagcgtctgatcctcgagcacaagatggctgctcgacggctaggcttctatgagctctac
gcgccgttgtacgccgtggacagtttcaagacaggcttgcgggagggaacgctgcctatc
ctgcgtttcttcacccatgacgtcgcgcggctagtccaagcgcagcgggcggacgatcgc
ttcgccgttgcgcgcttgttaagggacagctcgcccctgctcgcgtccatcgaagatggg
gaggtcgctgacatgcgtacgacgctggcggcggtgggtagagctctgggcgagctgatg
gacctgttcgagaacagtgcggacccaccgctgggtgacgtgcttcgcaccatcgccggg
agccggctcctgtctattcccgaaagcctgcagcccagcgccctccggaagaccgcgagc
caacccgcggacgcccacgacgaggaggctgacgatgagcggaccgccgcaatcgaccag
ttcctccaggcccggttttcgcaagtacccgggtacgatgactacgtctcagggagggcc
gcgttcgacacccaccaaggcgtgaagggtctggagttcccgcgggtgatggtgatcatg
gacgacctggaggccggcggctttacgtttagctacgagaagctgctcggcgttaatggc
gcggctaacgaggtcacccagcgcctcttctacgtcacgtgtagccgcgctgaggaaagc
ttggcgctcgtggcctacagcgccgatccggaagctgttcggcgcaatgttatcgccagt
ggctggctcgaaccgcgcgaggtcgaggtgatgaatcccagcgttgacaactcccgctga
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