Sphingosinicella sp. BN140058: ETR14_20180
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Entry
ETR14_20180 CDS
T05826
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sphs
Sphingosinicella sp. BN140058
Pathway
sphs03030
DNA replication
sphs03430
Mismatch repair
sphs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ETR14_20180
03430 Mismatch repair
ETR14_20180
03440 Homologous recombination
ETR14_20180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphs03032
]
ETR14_20180
03400 DNA repair and recombination proteins [BR:
sphs03400
]
ETR14_20180
Enzymes [BR:
sphs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ETR14_20180
DNA replication proteins [BR:
sphs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ETR14_20180
DNA repair and recombination proteins [BR:
sphs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ETR14_20180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
tRNA_anti-codon
COE1_HLH
ATPTG10
ChpA-C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QAY78598
UniProt:
A0A4P6G5W3
LinkDB
All DBs
Position
4477801..4481274
Genome browser
AA seq
1157 aa
AA seq
DB search
MSAPYVPLRIFSCYTMLEGAIEPKAIAKQAKKLDLPAAALTDRNGLYAAMAFTDACKGEG
VQPVVGTMLGLARPGTPDGKPPIIDWLALYAQTSAGYDNLCALVSAAHLDRPVEEEAHVR
FDFLEGRTEGLIALTAGAEGALARLIAEGQDSLADDVLGRLESLFPNRLYIELSRRGDAV
EEKAEARLIDLAYARNLPLVATNPARFVEPHFHQAHDAMLCIAQSSQIDRDDRRKSSPEA
WMKPAAEMRRLFEDLPEAIENTAVVARRCAVGAPKRKPILPSVAGDLEGEARQLREDAYA
GLEKRLAVYPDLTAEQRQVYLDRLEFEIKIIVGMGFPGYFLIVADFIKWAKDNDIPVGPG
RGSGAGSAVAWALTITDLDPLRLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQQR
YGADKVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLIPNHPTDPWTLDRALNGVS
ELAAEYKGDAQVRRLFDLAMKLEGLPRHSSTHAAGVVIGDRRLDALVPLYRDPRSDMPVT
QFDMKYVEGAGLVKFDFLGLKTLSVLQKAAHLLRKRGIDVAFDTLAWDDEEVYKLLQRGE
TVGVFQLESEGMRRTLAAVKPTNFEDIIALVSLYRPGPMDNIPTFGARKNGREPIEYPHA
LLENVLRETYGIFVYQEQVMEAAKVLAGYSLGEADLLRRAMGKKIKAEMDAQRERFVTGC
KANQIDKAKANELFDLIDKFAGYGFNKSHAAAYALVAYQTAWLKAHYPVEFYAASMCFDM
HQTDKLAIFVDDMRRLEIECLPPCVNASEAEFDVEPHGEGHAVRYALGALKGVGEKAMEQ
LVDERKINGRFKSLDDFAERVDPRLLNRRQIESLAAGGAFDALAPNRAAVFAAAETILAH
ASSAAEARTSGQGGLFGGESNVVPIRMPVAAAWSMAESMAAEKEAFGFYFSAHPVDRFRH
LAEAHGARSFGAYCAMPAPPDGGRSNGVMAGMVEDARWRTSARGRRYLMATMSDASGQFV
ATCFEDDVAERLEEAAKSGACALLTVELDRRPGDETPRVTIKQIQLFETLSKRARLQLEV
EVADEAALRRLAEALASERGGVGDLRLRARFDGGQAEVLLGRDFKLDADLAARIERLPGI
VAVNLSAAPAPRLALVS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccctacgttccgctccgaatcttctcctgctacacgatgctggaaggcgcg
atcgagccgaaggcgatcgccaagcaggcgaaaaagctcgatcttcccgcggcggcgctt
accgaccggaacggcctctatgccgcgatggcctttaccgatgcgtgcaaaggtgagggc
gtccagccggtggtcggcacgatgctcggcctcgcccggcccggaacgcccgacggcaaa
ccgccgatcatcgattggcttgccctctacgcgcagaccagcgccggctacgacaatctc
tgcgcgctggtctcggccgcgcatctcgatcgtcccgtcgaagaggaagcgcatgtccgc
ttcgactttctcgaggggcgcaccgaagggctgattgcgctgaccgccggtgccgagggc
gcgctggcccggctgatcgcggaagggcaggattcactcgccgacgacgtgctcggtcgg
ctggagtcgctgtttcccaaccggctctacatcgagctcagccgccgcggcgacgcggtc
gaggagaaagccgaagcgcggctgatcgacctcgcttatgcgcgcaatctgccgctggtc
gcgaccaatccggcgcggttcgtcgagccgcatttccaccaagcgcatgacgccatgctc
tgcatcgcgcaatcgagccagatcgaccgcgatgatcgccgcaaatcctcgcccgaggcc
tggatgaagccggctgccgagatgcgccgtctgttcgaggatcttcccgaagcgatcgag
aatacggcggtggtcgcgcgccgctgcgcggtcggcgcgccgaagcgcaagccgatcctg
ccgagcgtcgccggcgatctcgaaggcgaggcgcggcagctgcgcgaggacgcttatgcc
gggctcgagaaacggctcgccgtctatcccgatctcaccgccgagcagcgccaggtctac
ctcgatcggctggagttcgagatcaagatcatcgtcgggatgggcttccccggctacttc
ctgatcgttgccgacttcatcaaatgggccaaggacaacgacattccggtcggcccgggg
cgcggctcgggcgccgggtccgccgtcgcctgggcgctcaccatcaccgatctcgatccg
ctccggctcggcctgctgttcgaacgcttcctcaatccggaacgcgtgtcgatgcccgac
ttcgacatcgacttctgcgaaacccggcgcggcgaggtcatacgttacgtccagcagcgc
tacggcgctgacaaggtcgcgcagatcatcaccttcggaaagctgaaggcgcgcgccgtg
ctcaaggacaccggccgcgtgctgcagatgtcctatgggcaggtggatcgcctggccaag
ctgatcccgaatcatcccaccgacccgtggacgctcgaccgtgcgctgaacggcgtgtcg
gagcttgccgccgagtataagggcgacgcgcaggtccgccgcctcttcgacctggcgatg
aagctcgaaggcttgccgcggcacagctccacccacgccgccggcgtggtgatcggcgat
cgccggctcgatgctctggtgccgctctatcgcgatccgcgctcggacatgccggtcacc
caattcgacatgaaatatgtcgaaggcgcgggcctcgtgaagttcgactttctcggcctc
aagacgctgtcggtgctgcagaaggcggcacatctgctgcgcaagcgcggaatcgatgtc
gcgttcgacacgttggcgtgggatgacgaagaggtctacaagctgcttcagcgcggcgag
acggtgggcgtgttccagctcgaatccgaaggcatgaggcgcaccctggcggcggtgaag
ccgaccaatttcgaggacatcatcgcgctcgtctcgctctatcggccgggcccgatggac
aacattccgaccttcggcgcccgcaagaacggccgcgagccgatcgaatatccgcacgct
ttgctcgagaacgtgctgcgcgagacctatggcatcttcgtctaccaggaacaggtgatg
gaagccgccaaggtcctcgccggctacagcctcggcgaagccgatcttcttcggcgtgcc
atgggcaagaagatcaaggcggagatggacgcgcagcgcgaacgcttcgtcaccggctgc
aaggcgaaccagatcgacaaggccaaggccaacgaattgttcgatttgatcgacaagttc
gccggctacggcttcaacaagagccacgcggcggcctacgccctggtcgcctatcagacg
gcgtggctgaaggcgcattatccggtcgaattctacgcggcgtcgatgtgcttcgacatg
caccagaccgacaagctcgcgatcttcgtcgacgacatgcgccggctcgagatcgagtgc
ctgccgccctgcgtcaacgccagcgaggccgagttcgatgtcgagccgcatggcgaaggt
cacgccgttcgctatgcgcttggcgcgctcaagggcgtcggcgaaaaggctatggagcag
ctcgtcgacgaacggaagatcaacgggcgcttcaagtcgctcgatgatttcgccgaacgg
gtcgatccgcgcctgctcaaccgccgtcagatcgagagtctcgccgcgggcggagcgttc
gacgcgctggcaccgaaccgcgccgcagtgtttgctgctgccgagacgatcctggcgcac
gcgtcgagcgcagccgaggcgcggaccagcgggcagggcgggctgttcggcggcgagagc
aatgtcgtgccgatccggatgccggtcgccgccgcatggtcgatggccgagagcatggcg
gcggaaaaggaagcgttcggcttctatttttccgcgcatcctgtcgatcgcttccgccac
cttgccgaggcgcatggcgcacgcagcttcggcgcctattgcgcgatgccggcgccgccg
gacggcggccgctccaacggcgtgatggcgggcatggtcgaagatgcgcgctggcggacg
tcggcacgcggccgccgctatctgatggcgacgatgtcggatgcgtcggggcagttcgtc
gcgacctgcttcgaagacgatgtcgcagaacggctggaggaagcggccaagtccggcgcc
tgcgcgctgctcaccgtcgagctcgatcgccgccccggcgacgagaccccgcgtgtgacg
atcaagcagatccagctgttcgaaaccctgtcgaagcgcgctcgtctgcagctcgaagtc
gaggttgccgacgaagcggcgctgcgccgccttgccgaggcattggcaagcgagcgcggc
ggcgtcggcgatcttcgcctgcgcgccaggttcgatggtggtcaggccgaggtgctgctc
ggccgcgacttcaagctggacgccgatctcgcggcgcgcatcgagcgtctgccgggcatc
gtcgccgtcaatctctcggccgcccccgcgccgcggcttgcgctggtctcctga
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