Sphingosinicella sp. BN140058: ETR14_22750
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Entry
ETR14_22750 CDS
T05826
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sphs
Sphingosinicella sp. BN140058
Pathway
sphs03410
Base excision repair
sphs03430
Mismatch repair
sphs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETR14_22750
03430 Mismatch repair
ETR14_22750
03440 Homologous recombination
ETR14_22750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphs03400
]
ETR14_22750
DNA repair and recombination proteins [BR:
sphs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ETR14_22750
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ETR14_22750
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ETR14_22750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
QAY79042
LinkDB
All DBs
Position
5021673..5022725
Genome browser
AA seq
350 aa
AA seq
DB search
MRTRDAEAIGRAFANAVDGFPRERAPLILGHFDADGLASIALIARAMERAGRPAETRIVG
KGENAWSDAMRAELAARRPGGLIVADLGVRSGALLAGVPTILVDHHVPTGAPDGALVLSG
NGVEPEPTSALIAYWCASGLAPAEDLLWLAAIGLIGDMAVDAGFPELAEAQARYGKTALR
NAVALINAPRRTAAADAGPALSLLLTCDSPKELLSGVHADTARLHAAKAEVACELESARR
VPPNVRGEVALIRFDSPCQIHPLIAQQWRGRLRDRIVIAANGGYRPGWVHFAARSASGRD
LIAFLDAHRPKGADGHYGNGHRQATGGALPHPVWNEFISKLGFPEEQVES
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccagagatgccgaagcgatcgggcgcgcctttgcgaatgcggtggatggcttt
ccgagagagcgagcgccgctgatcctcggccatttcgatgccgacggccttgcctcgatc
gcgctcatcgcccgggcgatggagcgggcgggccgcccggcggaaacccggatcgtcggc
aagggcgagaatgcctggtcggacgccatgcgcgcggagctcgccgcccggcgacccggt
ggattgatcgtcgccgatctcggcgttcgctccggtgctctgctggccggagtcccgacc
atcctcgtcgatcatcatgtgccgacgggcgcgcccgacggagcactggtgctcagcggc
aacggcgtcgaacccgagccgaccagcgccctgatcgcctattggtgcgcgtccgggctt
gcaccggcggaggatctgctgtggctggcagcgatcggtctgatcggcgacatggccgtc
gatgccggcttccccgaactcgccgaagctcaggcgcgctacggcaagaccgctttgcgc
aatgccgtggccctgatcaatgcgccgcgccgcaccgcggccgcagatgccggtccggcg
ctctcactcctgctcacgtgcgacagcccgaaggaactgctttcgggcgtgcacgccgac
accgcgcgccttcatgccgccaaggcggaggtcgcctgcgaactggagagcgcccgccgc
gtcccgccgaacgtgcgcggagaggtggctttgatccggttcgattccccttgccagatt
catcccctgatcgcgcagcaatggcggggacggctgcgcgaccggatcgtcatcgccgcc
aacggagggtaccgccccggttgggtccacttcgccgcgcgtagcgccagcggccgcgac
ctcatcgcctttctcgacgcgcatcggcccaagggggccgacggccactatggcaacggc
catcgtcaggcgaccggcggcgcactgccgcatccggtctggaacgaattcatctcgaag
ctcggctttcccgaggagcaagtggaatcatga
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