Sphingosinicella sp. BN140058: ETR14_25310
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Entry
ETR14_25310 CDS
T05826
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sphs
Sphingosinicella sp. BN140058
Brite
KEGG Orthology (KO) [BR:
sphs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphs03009
]
ETR14_25310 (rimO)
Enzymes [BR:
sphs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ETR14_25310 (rimO)
Ribosome biogenesis [BR:
sphs03009
]
Prokaryotic type
ribosomal protein modification factors
ETR14_25310 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QAY79491
UniProt:
A0A4V0YIV1
LinkDB
All DBs
Position
5576241..5577572
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AA seq
443 aa
AA seq
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MTLTLPSAPKVGMVSLGCPKALVDSERILTKLRSDGYQLSSDYEAADVVLVNTCGFLDSA
KEESLAAIGEAIAENGRVIVTGCMGNEAEVIRNKFPEVLAITGPHQYESVVGAVHVAAPM
PPSAYLNLVPEGGLKLTPRHYSYLKISEGCNHRCSFCIIPSIRGDLVSRRPDAILREAEK
LVAAGTRELLVISQDTSAYGVDLRHAAWPWKGGEVRAHMTDLARALGTLGAWVRLHYVYP
YPHVDQVIPLMAEGLVTPYLDIPFQHAAPSVLKAMKRPANEAKVLERIRGWRDICPDIAI
RSSFVVGFPGETEADFEYLLQWLEEAQLDRVGGFRFEPVTGAAANALPGVVPEEVKEERY
ARLMETTARISAAKLQAKVGREIDVIIDLADGEGGASGRSKADAPEIDGEVHLRDAPDAK
PGDILRVLVEDADEHDLFGVPVG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacactcacacttccctccgcgccgaaagtcggcatggtctcgctcggctgcccgaag
gcgctggtcgattccgagcgtatcctcaccaagctgcgctccgacgggtaccagctctcc
tccgattatgaggcggccgacgtcgttctggtcaacacctgcggctttctcgattccgcg
aaggaggaaagcctcgccgcgatcggcgaagcgatcgccgaaaatggccgggtgatcgtc
accggctgcatgggcaatgaagcggaagtgatccggaacaagtttccggaggtgctcgcg
atcaccggcccgcaccaatatgaaagcgtggtcggcgccgtgcacgtcgccgcgccgatg
ccgccctcggcctatctgaacctggtcccggagggcgggctcaagctcaccccgcgtcat
tattcctatctgaagatctcggaaggctgcaaccatcgctgcagcttctgcatcatcccc
tcgattcgcggcgatctggtcagccggcggcccgatgcgatcctgcgcgaagccgagaag
ctggtggcggcggggacccgcgaattgctggtgatcagccaggatacctcagcctacgga
gtcgatctccgtcatgccgcctggccgtggaaaggcggcgaggtccgcgcccacatgacc
gatctcgcccgcgcgctcggcacgttgggcgcttgggtgcggctccattacgtctacccc
tacccccatgtcgatcaggtcattccgctgatggcggaggggctggtgacgccgtatctg
gacattccgttccagcatgcggcaccatcggtgctgaaggcgatgaagcgcccggccaac
gaagccaaagtgctcgagcggatccgcggctggcgtgacatctgtccggacatcgcgatc
cgttcctccttcgtggtcggctttcccggcgagaccgaggccgatttcgagtatctgctg
cagtggctcgaggaagcacagctcgaccgggtcggcggcttccgcttcgagccggtgacc
ggcgcagcggccaatgccctgcccggcgtcgttcccgaagaggtcaaggaagagcgctac
gcgcggctgatggagaccaccgcccggatctccgccgcgaagctgcaggcgaaggtcggc
cgcgagatcgacgtcatcatcgatcttgccgacggtgaaggcggcgcctcgggccgctcc
aaggccgacgcgcccgaaatcgacggcgaagtgcatctgcgcgatgcgcccgatgcgaaa
ccaggcgacatcctgcgcgtcctcgtcgaagatgcggacgaacacgacctgttcggcgtt
ccggtcggctaa
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