Sphingobium sp. TKS: K426_00025
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Entry
K426_00025 CDS
T04965
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht03030
DNA replication
spht03430
Mismatch repair
spht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K426_00025
03430 Mismatch repair
K426_00025
03440 Homologous recombination
K426_00025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spht03032
]
K426_00025
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_00025
Enzymes [BR:
spht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K426_00025
DNA replication proteins [BR:
spht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K426_00025
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K426_00025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMK20969
UniProt:
A0A126RFW0
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All DBs
Position
1:3055..3747
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AA seq
230 aa
AA seq
DB search
MREIIFDTETTGFDPASGDRLVEIGCIELFNRVPTGRTFHAYYNPQRSMPAAAEAVHGLS
DGFLRDKPVFSHGVQELLAFLEDSHLVAHNARFDFGFLNHELKLCGLPEVSMERMIDTVA
IARQLHPGAKHSLDALCTRYGIDRSHRIKHGALLDAELLAQLYIELTGGRQIGLGLAQEE
EKLVVNMELAAKVAVRPVRPARVFAASAEELERHAAFVATLDKPLWLEEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagattattttcgacaccgaaacgactggcttcgaccctgcctcaggcgatcgt
ctggtcgaaatcggatgtattgagctcttcaatcgggtgcccacgggccgtaccttccat
gcttattataatccgcagcggtctatgcccgcagcggcggaggccgtgcacgggctgtcg
gacggttttctgagggacaagccggtgttttcgcacggtgtccaggaattgctggccttt
ctggaggacagccatctggtcgcgcataatgcgcgcttcgacttcggcttcctcaatcat
gaactcaagctttgcggcctgcccgaagtgtcgatggagcggatgatcgacaccgtcgcc
atcgcccgccaactccaccccggcgccaagcacagcctggacgcgctctgcacccgctac
ggtatcgaccgcagccatcgcatcaagcatggcgccttgctcgacgccgaattgctggcc
cagctttacatcgaactgaccggcggccgtcagatcggccttggtcttgcacaggaggaa
gagaaactcgttgtaaatatggaacttgcggcgaaagtagcggttcgccctgtacgcccc
gcgcgcgtctttgcggccagcgcggaggagctggagaggcatgcagcgttcgtcgcgacg
ctggacaagccgctctggcttgaggaggcctga
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