Sphingobium sp. TKS: K426_00175
Help
Entry
K426_00175 CDS
T04965
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spht03016
]
K426_00175 (trmE)
Transfer RNA biogenesis [BR:
spht03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
K426_00175 (trmE)
Prokaryotic type
Methyltransferases
K426_00175 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
RsgA_GTPase
AAA_18
AAA_25
AAA_28
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AMK20999
UniProt:
A0A126RG01
LinkDB
All DBs
Position
1:30182..31465
Genome browser
AA seq
427 aa
AA seq
DB search
MTDTIFALSSGAPPAGIGVIRISGPLAGPALAALAGSLPPPRRARLSSLTDPRDGTLLDR
ALILWFPGPDTATGEDLAELHCHGARAVIAALEDALGTQPGLRRAEAGEFTRRAFDNGRM
DLNAVEGLSDLLAAETQQQRRAALLMAEGHFSRRVEGWRRTLLDLSAMTEAALDFSDEDD
VPDEGIEVRIGQGIRTLAQDIETVLAAPSAERLRDGVRVVLAGPPNAGKSTLLNYLVGRE
AAIVSDIAGTTRDRIEVPAALGGVAFLFTDTAGLRAETGDVIEAIGMERARSALDAADII
LWLGLAGEAPRGDAVLIAAQCDRGGEGERPGLQLSAVTGEGMADLVAILLDRAAGLLPGE
GDYALHKRQRDAATLLRSHLILADASHDLLIVAEELRQSRNAIDQLTGRASTEDMLDHLF
AGFCIGK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgacggatactatcttcgcgctgtcgagcggcgcgcccccggctggcatcggcgtgatc
cgcatcagcgggccgttggctggaccggctcttgcggctttggcggggagcttgccgccg
ccgcgccgggcgcggctttcgtccttgaccgatccgcgcgacggcactttgctcgaccgg
gcgctgatcctgtggtttcccggtcctgatacggcgaccggcgaagacctggcagaattg
cattgccatggcgcgcgcgcggtgattgccgcgctggaggatgcgcttggtacgcagccc
ggattgcgccgggcggaagcgggggagtttacccgccgcgctttcgacaatggccgcatg
gacctcaacgcggtggagggtctgtccgatcttctcgccgccgaaacgcagcagcagcgt
cgcgccgcgctgttgatggcggaggggcatttctcccgccgggtggaggggtggcgccgg
acactgcttgatctttccgccatgaccgaggcggccctggatttttccgatgaggatgat
gtgcccgatgaggggattgaagtccggatcgggcagggcatccggaccttggcgcaggac
atcgaaacggtgctcgccgccccctcggccgaacggctgcgagatggggtgcgcgtggtt
ttggcgggtccgcccaatgcgggcaagtccacgttgctcaactacctcgtcgggcgggaa
gcggccattgtgtcggatattgcggggacgactcgagaccggatcgaggtgcccgccgcg
ctgggtggggtcgctttcctgttcaccgatacagcgggcctgcgtgccgagacgggcgat
gtgatcgaggcgatcggcatggagcgggcgcgaagtgcgcttgatgcggcagatatcatt
ctttggctcggtctggcgggagaggcgccccgtggcgatgccgtcctgatcgctgcgcaa
tgcgatcggggcggagagggggagcgacctggtcttcagctctctgcggtgacgggggaa
gggatggctgatttggtcgcgatcctgctcgaccgggcggctggcctgctgccgggggag
ggggactacgccctgcacaagcggcagcgggatgcggcgacccttttgcgctcccatttg
atcttggcggatgcgagccatgatttgttgatcgtagcagaggaattgcggcagtcgcgt
aatgccatcgatcaactgacggggcgggcgagtaccgaagatatgctcgaccatctgttc
gccggattctgtatcggcaaatag
DBGET
integrated database retrieval system
