Sphingobium sp. TKS: K426_00880
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Entry
K426_00880 CDS
T04965
Symbol
ruvA
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
spht
Sphingobium sp. TKS
Pathway
spht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K426_00880 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_00880 (ruvA)
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K426_00880 (ruvA)
RecFOR pathway proteins
K426_00880 (ruvA)
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Sirohm_synth_M
Motif
Other DBs
NCBI-ProteinID:
AMK21138
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Position
1:complement(180755..181363)
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AA seq
202 aa
AA seq
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MIAKLKGRLDSTGLDHAIIDVGGVGYLVGASSRTLAALGPVGEAVTIHTEMLVSADAIRL
VGFARAEERDWFRLLTGVQGVGSRVALAILSALEPAELHRAVATGDKAMIARANGVGPKL
AQRIANELKDKIGAVPMPTGAVGGGFAVVPTGGHGADAISALQNLGFRPAEASSAVASAE
EELGEDASLDALVRLALRKAAK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaaaactcaagggacggctggacagcaccggcctggaccatgccatcatcgat
gtgggcggggtcggctatctggtcggcgcctcctcccgcacgctcgccgcgctggggccg
gtgggggaggcggtgacgatccacaccgaaatgctggtgtcggccgatgcgatccgcctc
gtcggcttcgcccgggcggaggaacgcgactggttccgcctgctgaccggcgtgcagggc
gtgggttcgcgggtggcgctggccatcctctccgcgctcgaaccggcggaattgcatcgc
gccgtggcgaccggggacaaggcgatgatcgcgcgggccaatggcgtcggccccaagctc
gcccagcgcatcgccaatgagttgaaggacaagatcggcgcagtgcccatgcccaccggc
gcggtcggcgggggatttgcggtcgtgccgaccggcggccatggcgccgatgcaatctcc
gcgctgcagaatctgggcttcaggcccgccgaagccagcagcgccgtcgcctccgccgaa
gaggaactgggcgaagacgcctcgcttgacgctctggtccgcctcgctctcaggaaagcg
gcgaaatga
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