Sphingobium sp. TKS: K426_01805
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Entry
K426_01805 CDS
T04965
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K426_01805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spht03019
]
K426_01805
03110 Chaperones and folding catalysts [BR:
spht03110
]
K426_01805
03029 Mitochondrial biogenesis [BR:
spht03029
]
K426_01805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spht04147
]
K426_01805
Enzymes [BR:
spht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
K426_01805
Messenger RNA biogenesis [BR:
spht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K426_01805
Chaperones and folding catalysts [BR:
spht03110
]
Heat shock proteins
HSP60 / Chaperonin
K426_01805
Mitochondrial biogenesis [BR:
spht03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
K426_01805
Exosome [BR:
spht04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K426_01805
Exosomal proteins of other body fluids (saliva and urine)
K426_01805
Exosomal proteins of breast cancer cells
K426_01805
Exosomal proteins of colorectal cancer cells
K426_01805
Exosomal proteins of bladder cancer cells
K426_01805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
AMK21322
UniProt:
A0A126RGY4
LinkDB
All DBs
Position
1:370662..372281
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKQNDKAGDGTTTATVLAQSIVREGSKAVAAGMNPMDLKRGI
DLAVGAVVQDLAAHAKKVSANSEIAQVATISANGDAEVGRILAEAMEKVGNEGVITVEEA
KSLATELETVEGMQFDRGYLSPYFVTNAEKLKVELEDPYILIHEKKLSNLQALIPLLEQV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTAGNV
VSEELGTKLENVTLGMLGRAKKIIIDKDNTTVVDGAGARSDIDARVAQIRAQIETTTSDY
DREKLQERVAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGILPGGGIALL
RALKALDGLKAANDDQQSGIDIVRRALRSPARQIADNAGEDGAFIVGKLLESSDYNWGFN
AATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDKAAPMPAMDY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtgaaatttgcgtcggacgcgcgtgatcgcatgctgcgcggcgtg
gatacgcttgcgaatgcagtaaaggtcacgctcggtcccaagggccgcaatgtcgtgatc
gagaagagcttcggcgctccgcgcattaccaaggacggcgtcaccgtcgccaaggagatc
gagctcaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaagtggcctcgaag
cagaacgacaaggcgggtgacggaaccaccacggccactgtgctcgcccagtcgatcgtg
cgcgagggctcgaaggcggtggccgccggcatgaacccgatggacctgaagcgcggcatc
gatctggcggtcggcgccgtggtccaggatctcgctgcgcatgccaagaaggtcagcgcc
aacagcgagatcgcccaggtcgccaccatatcggccaatggcgatgctgaagtcggccgc
attctcgctgaagccatggagaaggtcggcaatgagggcgtcatcacagtcgaggaggcg
aagagcctcgcgaccgagctcgaaacggtcgagggcatgcagttcgatcgcggctatctc
tcgccctatttcgtgaccaacgccgagaagctcaaggtcgagctcgaggacccctatatt
ctcatccacgagaagaagctgtccaacctgcaggccctcattccgctgctggagcaggtg
gttcagtcgggccggccgcttctcattatcgccgaggacgtcgaaggcgaggcgctggcc
acgctcgtcgtcaacaagctccgcggtgggctcaaggtcgcggccgtcaaggcgcctggc
ttcggcgatcgccgcaaagcgatgctcgaggatatcgcaatcctcaccgccggcaatgtg
gtcagcgaggaactcggcacgaagctggaaaacgtaacgctggggatgctcggccgcgcc
aagaagatcatcatcgacaaggacaacaccaccgtcgtcgatggcgcaggcgcacgctcg
gacatcgatgcccgggtcgcgcagatccgtgctcagatcgagaccacgaccagcgactat
gaccgcgaaaagctgcaggagcgcgtagccaagctagcaggcggcgtcgcggtcattcgc
gtcggcggtgcgaccgaagtcgaggtcaaggaaaagaaggatcgtgtcgatgacgcgctc
cacgccactcgcgccgcggtcgaggaaggcatcctgccgggcggcggcatcgctctgctc
cgcgcgctgaaggcactcgacggtctcaaggcggccaacgacgaccagcagtccggcatc
gacatcgtcaggcgggctctgcgctcgccggcgcggcagatcgccgacaatgcgggcgag
gacggcgccttcatcgtgggcaagcttctggaaagcagcgactacaactggggcttcaac
gccgccaccggcgaatatgaagacctggtgaagtcgggcgtcatcgatccggccaaggtc
gtgcgtaccgccctccaggacgccgcctcggtcgcctcgctgctcatcactaccgaggcg
ctcgtggccgagcttccaaaggaagataaggccgcgccgatgccggcgatggattactga
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