KEGG   Sphingobium sp. TKS: K426_01805
Entry
K426_01805        CDS       T04965                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
spht  Sphingobium sp. TKS
Pathway
spht03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spht00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K426_01805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spht03019]
    K426_01805
   03110 Chaperones and folding catalysts [BR:spht03110]
    K426_01805
   03029 Mitochondrial biogenesis [BR:spht03029]
    K426_01805
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spht04147]
    K426_01805
Enzymes [BR:spht01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     K426_01805
Messenger RNA biogenesis [BR:spht03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     K426_01805
Chaperones and folding catalysts [BR:spht03110]
 Heat shock proteins
  HSP60 / Chaperonin
   K426_01805
Mitochondrial biogenesis [BR:spht03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    K426_01805
Exosome [BR:spht04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   K426_01805
  Exosomal proteins of other body fluids (saliva and urine)
   K426_01805
  Exosomal proteins of breast cancer cells
   K426_01805
  Exosomal proteins of colorectal cancer cells
   K426_01805
  Exosomal proteins of bladder cancer cells
   K426_01805
SSDB
Motif
Pfam: Cpn60_TCP1 Pho88 SHOCT-like_DUF2089-C
Other DBs
NCBI-ProteinID: AMK21322
UniProt: A0A126RGY4
LinkDB
Position
1:370662..372281
AA seq 539 aa
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKQNDKAGDGTTTATVLAQSIVREGSKAVAAGMNPMDLKRGI
DLAVGAVVQDLAAHAKKVSANSEIAQVATISANGDAEVGRILAEAMEKVGNEGVITVEEA
KSLATELETVEGMQFDRGYLSPYFVTNAEKLKVELEDPYILIHEKKLSNLQALIPLLEQV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTAGNV
VSEELGTKLENVTLGMLGRAKKIIIDKDNTTVVDGAGARSDIDARVAQIRAQIETTTSDY
DREKLQERVAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGILPGGGIALL
RALKALDGLKAANDDQQSGIDIVRRALRSPARQIADNAGEDGAFIVGKLLESSDYNWGFN
AATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEDKAAPMPAMDY
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggctgccaaggaagtgaaatttgcgtcggacgcgcgtgatcgcatgctgcgcggcgtg
gatacgcttgcgaatgcagtaaaggtcacgctcggtcccaagggccgcaatgtcgtgatc
gagaagagcttcggcgctccgcgcattaccaaggacggcgtcaccgtcgccaaggagatc
gagctcaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaagtggcctcgaag
cagaacgacaaggcgggtgacggaaccaccacggccactgtgctcgcccagtcgatcgtg
cgcgagggctcgaaggcggtggccgccggcatgaacccgatggacctgaagcgcggcatc
gatctggcggtcggcgccgtggtccaggatctcgctgcgcatgccaagaaggtcagcgcc
aacagcgagatcgcccaggtcgccaccatatcggccaatggcgatgctgaagtcggccgc
attctcgctgaagccatggagaaggtcggcaatgagggcgtcatcacagtcgaggaggcg
aagagcctcgcgaccgagctcgaaacggtcgagggcatgcagttcgatcgcggctatctc
tcgccctatttcgtgaccaacgccgagaagctcaaggtcgagctcgaggacccctatatt
ctcatccacgagaagaagctgtccaacctgcaggccctcattccgctgctggagcaggtg
gttcagtcgggccggccgcttctcattatcgccgaggacgtcgaaggcgaggcgctggcc
acgctcgtcgtcaacaagctccgcggtgggctcaaggtcgcggccgtcaaggcgcctggc
ttcggcgatcgccgcaaagcgatgctcgaggatatcgcaatcctcaccgccggcaatgtg
gtcagcgaggaactcggcacgaagctggaaaacgtaacgctggggatgctcggccgcgcc
aagaagatcatcatcgacaaggacaacaccaccgtcgtcgatggcgcaggcgcacgctcg
gacatcgatgcccgggtcgcgcagatccgtgctcagatcgagaccacgaccagcgactat
gaccgcgaaaagctgcaggagcgcgtagccaagctagcaggcggcgtcgcggtcattcgc
gtcggcggtgcgaccgaagtcgaggtcaaggaaaagaaggatcgtgtcgatgacgcgctc
cacgccactcgcgccgcggtcgaggaaggcatcctgccgggcggcggcatcgctctgctc
cgcgcgctgaaggcactcgacggtctcaaggcggccaacgacgaccagcagtccggcatc
gacatcgtcaggcgggctctgcgctcgccggcgcggcagatcgccgacaatgcgggcgag
gacggcgccttcatcgtgggcaagcttctggaaagcagcgactacaactggggcttcaac
gccgccaccggcgaatatgaagacctggtgaagtcgggcgtcatcgatccggccaaggtc
gtgcgtaccgccctccaggacgccgcctcggtcgcctcgctgctcatcactaccgaggcg
ctcgtggccgagcttccaaaggaagataaggccgcgccgatgccggcgatggattactga

DBGET integrated database retrieval system