Sphingobium sp. TKS: K426_02545
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Entry
K426_02545 CDS
T04965
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K426_02545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spht03021
]
K426_02545
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_02545
Enzymes [BR:
spht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K426_02545
Transcription machinery [BR:
spht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K426_02545
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K426_02545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
AMK21465
UniProt:
A0A126RIQ9
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All DBs
Position
1:complement(488240..489304)
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AA seq
354 aa
AA seq
DB search
MTVNMKNWQELKKPNSLEIKVAGDGKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNIKQVALRMEGDGPRRLQLSATGPAEVRAGDI
ITVGDIEVMNPDLVICHLDQGATLNMELTADIGKGYVPAVANRPADAPIGLIPIDALYSP
VRQVAYKVDNTRVGQELDYDKLSLTLETDGTVTPEDAVAYAARILQDQLQLFVHFEDALP
VAAPAAGASAGASAGEGESDANQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatgaagaactggcaggaattgaagaagcccaacagccttgagatcaag
gtggcgggcgacggcaagcgcaaggcgacgttcgtcgctgaacctctggagcgcggcttc
ggtctgacgcttggcaatgcgctgcgccgggttcttctgtcctcgctccagggcgcggcg
gtcacctcgatcaagatcgagaacgtcctccacgaattctcctcgctcgccggcgtgcgc
gaagatgtgacggacatcgtcctcaacatcaagcaggtcgcgctgcgcatggaaggcgac
ggtccgcgccgtctccagctgtccgccaccggccctgccgaagtgcgcgcgggagacatc
atcaccgttggcgacatcgaagtgatgaaccccgatctggtgatctgtcatctggaccag
ggcgcgaccctcaacatggaactgaccgctgacatcggcaagggctatgtccccgccgtt
gccaaccgtccggcggacgccccgatcggcctgatcccgatcgatgcgctctactcgccg
gtccgtcaggtcgcctacaaggtcgacaatacccgcgtcggccaggaactggactatgac
aagctgtcgctgacgctcgagaccgacggcaccgtcacgccggaagacgcggtggcctat
gccgcccgcatcctgcaggaccagctccagctcttcgtccacttcgaggacgcgctgccc
gtcgccgctccggccgccggtgcctctgcgggtgcctcggctggcgaaggcgaaagcgac
gcgaaccagatcaaccgctatctgctcaagaaggtggacgagctggaactgtcggtccgc
agcgccaactgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagacc
gaggccgagatgctgcgcaccccgaatttcggccgcaagtcgctcaatgagatcaaggaa
gtgctgtcgtccatgggcctgcgcctggggatggacatccccggctggccgccggaaaat
atcgaggaaatggccaagaagctcgaacaggagctgctgggctaa
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