Sphingobium sp. TKS: K426_02625
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Entry
K426_02625 CDS
T04965
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00730
Thiamine metabolism
spht01100
Metabolic pathways
spht01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K426_02625
Enzymes [BR:
spht01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
K426_02625
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AMK21482
UniProt:
A0A126RHD4
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All DBs
Position
1:503443..505341
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AA seq
632 aa
AA seq
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MADVDSKIELASDGSQRPARTEMRVTTGPIRGSRKIHVGPLKVAMREIDLEPGSGEPPVR
VYDTSGPYTDPNARIDIMAGLPQLRRDWIIARGDVEEYDARAIKPEDNGLKGPDRSGGVQ
PFPNLVQRPLRAKAGANVSQMHYARRGIITPEMEYVAERENLGRARLAEYVRDGHDWGAE
IPDYVTPEFVRDEVARGRAIIPNNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEV
DKLVWSIRWGADTVMDLSTGRNIHDTREWIMRNSPVPIGTVPIYQALEKVGGIAEELTWE
IFRDTLIEQAEQGVDYFTIHAGVRLPYIPMTAKRVTGIVSRGGSIMAKWCLAHHKESFLY
EHFDEITQIMKAYDIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWEQDVQVMIE
GPGHVPMHKIKQNMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAML
CYVTPKEHLGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSRARFEFRWRDQF
NLSLDPDTAEKYHDQTLPAEGAKSAHFCSMCGPKFCSMKITQEVRDFAAKQNQPADSFLA
AEDAEKGMAEMSEIFRQTGSELYMGAGDREHD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgattcgaagattgaactggcttccgatggaagccagcggccagcccgc
acagagatgcgcgtcaccaccggccccatccggggcagtcgcaagatccatgtcggcccc
ttgaaggtcgcgatgcgcgagatcgacctggaaccgggcagcggcgagccgcccgtccgc
gtctatgacacttccggcccctataccgatccgaatgcgcgcatcgacatcatggcgggc
ctcccgcaactgcgccgcgactggatcatcgcccgcggcgatgtcgaggaatatgacgcc
cgggcgatcaagcctgaagacaatggtctcaaaggccccgaccgcagcggcggcgtccag
cccttcccgaacctcgtccagcgcccgctgcgcgccaaggccggcgccaacgtctcccag
atgcactatgcccgccgcggcatcatcacgccggagatggaatatgtggcggagcgcgag
aatctcggtcgtgcccgcctcgcggaatatgtgcgcgacggccatgactggggcgcggaa
atccccgactatgtgacgccggagttcgtccgcgatgaggtcgcgcgcggccgcgccatc
atccccaacaatatcaaccacccggaatcggaaccgatggcgatcggccgcaatttcctg
gtgaagatcaacgccaatatcggcaacagcgccgtcgcttcggacgtggcgagcgaagtc
gacaagctggtctggtcgatccgctggggcgccgacacggtgatggacctgtcgaccggc
cgcaacatccacgacacccgcgaatggatcatgcgcaactcgccggtcccgatcggcacc
gtgccgatctatcaggcgctggagaaggtgggcggcatcgccgaggaactgacctgggaa
atcttccgcgacacgctgatcgagcaggccgagcagggcgtcgactatttcaccatccat
gcgggcgtgcgcctgccctatatcccgatgaccgccaagcgcgtcaccggcatcgtctcg
cgcggcgggtcgatcatggcgaaatggtgcctcgcccatcacaaggaaagcttcctctac
gagcatttcgacgagatcacgcagatcatgaaggcctatgacatcgcctattcgctgggc
gatggcctgcgtcccggttcgatcgcggacgccaatgacgaggcacagtttgccgagctc
tacacgctgggcgaactcaccaagcgcgcctgggaacaggatgtgcaggtgatgatcgaa
ggccccggccatgtgccgatgcacaagatcaagcagaatatggacaagcagcttgaggcc
tgcggcgaggcgcccttctacacgcttgggccgctcaccaccgacatcgcgccgggctat
gaccatatcaccagcggcatcggtgccgcgatgatcggctggtacggcacggcgatgctc
tgctatgtcacgcccaaggagcatctgggcctgcccgaccgcgacgacgtcaaggtgggc
gtggtgacttacaagctcgccgcccacgccgctgatctggcgaagggacaccccgccgcc
aaggtccgcgacgatgcgctttcccgcgcccgtttcgaattccgctggcgtgaccagttc
aacctgtcgctcgacccggatacggcggaaaaatatcacgatcagacgctcccggccgaa
ggcgccaagagcgcgcatttctgctccatgtgcggccccaaattctgctcgatgaagatc
acgcaggaggtgagggatttcgccgcgaagcagaaccagcccgctgacagcttcctcgcg
gcggaggatgccgagaagggcatggctgaaatgagcgaaatcttccggcagacaggcagc
gagctttatatgggcgccggcgaccgggagcatgattga
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