KEGG   Sphingobium sp. TKS: K426_03610
Entry
K426_03610        CDS       T04965                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
spht  Sphingobium sp. TKS
Pathway
spht02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spht00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K426_03610
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spht02044]
    K426_03610
Enzymes [BR:spht01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     K426_03610
Secretion system [BR:spht02044]
 Type IV secretion system
  Trb secretion system protein
   K426_03610
SSDB
Motif
Pfam: T2SSE Zeta_toxin TrwB_AAD_bind AAA_16 FtsK_SpoIIIE DEAD AAA_19 AAA_28 ABC_ATPase MMR_HSR1 nSTAND3 CbiA ATPase GTP_EFTU P-loop_TraG AAA_22 RecA_N MobB Septin AAA_7 Mg_chelatase AAA_2 Sigma54_activat
Other DBs
NCBI-ProteinID: AMK21678
LinkDB
Position
1:complement(686272..687210)
AA seq 312 aa
MLRTALGPAIARLLEDPCVVEVMLNPDGRLWIDRLSEGLSDTGEHLSAADGERIVRLVAH
HVGVEVHTGAPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLGDYVAAGIMAR
DQAEALRVGVATRANILVAGGTSTGKTTLTNALLAEVAKTDDRVVIIEDTRELQCAAPNL
VAMRTKDGVASLSELVRSSLRLRPDRIPIGEVRGSEALDLLKAWGTGHPGGIGTIHAGSA
IGALRRMEQLIQEAVVTVPRALIAETIDLIAVLAGRGASRRLVELARVEGLGPDGDYRVT
PIVPQSAEGACQ
NT seq 939 nt   +upstreamnt  +downstreamnt
atgctgcgcaccgcgctcggccccgccattgcccgccttctggaagacccttgtgtcgtt
gaagtgatgctcaatcccgacgggcggttgtggatcgatcgcctttcggaaggcctgtcg
gataccggcgagcacctgtcagccgccgatggcgagcgcatcgttcgcctggtcgcacac
catgtcggtgtcgaagtccacaccggcgcaccgcgcgtatcagcagaacttcccgaaaca
ggggagcggttcgaggggctgctcccgcctgtcgtcgccgcgccagccttcgccatccgg
aaacccgccgtcgcggtctttacgctgggggactatgtcgctgcggggatcatggcgagg
gaccaggccgaggctctgcgggtcggtgttgcgacgcgcgccaacatcctcgtcgctggc
ggcacctcaaccggcaaaaccacgctcaccaacgcgctcctcgctgaagtcgcgaaaacc
gacgatcgcgtcgtcatcatcgaagacacgcgcgagctgcaatgcgccgcccccaacctt
gtcgccatgcgcaccaaggatggcgttgcatcgctgtccgaactggtccgctcgtcgctg
cgccttcgtcccgaccgcattccaatcggtgaagtgcgcgggagcgaagccctcgatctc
ctgaaagcctggggaaccgggcatcccggcgggatcgggacgatccacgccggtagcgcc
atcggtgccctgcgccggatggagcaactcatccaggaagccgtcgtgaccgtgccccgc
gcgctgatcgcggaaaccatcgatctcatcgccgtcctcgccggccgcggcgcctctcgc
cgcctggtcgaacttgcccgcgtcgagggccttggaccggacggcgactaccgcgtcact
cccatcgtccctcagtccgcagaaggagcctgccaatga

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