Sphingobium sp. TKS: K426_06060
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Entry
K426_06060 CDS
T04965
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spht03019
]
K426_06060
Messenger RNA biogenesis [BR:
spht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K426_06060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
AAA_22
Rad17
YfeC-like
AAA_18
AAA_28
T2SSE
AAA_30
YqbF
AAA_16
Zeta_toxin
Integrase_1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMK22158
UniProt:
A0A126RIV0
LinkDB
All DBs
Position
1:complement(1195427..1196359)
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AA seq
310 aa
AA seq
DB search
MSFETPKTILLVSGLSGAGKTTALKTLEDMGWEVVDNLPLVLLGRLLDTPLPEGHNEGID
RPLALGIDARTRGFDAGAIVQRIKALRSRHGHDVETLFLDCSDAELERRFAETRRRHPLA
ADRPAAHGIARERELTEPLRRWANQVIDTSSLSSNGLQQEIRNRFSREGLSDPVLTIMSF
GYSRGVPLSADLMFDMRFLRNPHWEDALRPKTGLDPDVAAYIMEDPAYEEAIGRIEQLLT
LLLPRYAGGGKSYITVAFGCTGGRHRSVHVTERVARYLQDAGFSPTVSHRNMESAPQDAL
EKRGPGGPKA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttcgaaacgccgaagaccatattgctcgtttccggcctgtctggcgcgggcaag
accaccgcgctcaagacgctggaggatatgggttgggaagtggtggacaatctgccgctg
gtgctgctcggccggctgctcgacactcccctgcccgaagggcataacgaggggatcgac
cggccgctcgcgctgggcatcgatgcgcgtacccgcggcttcgacgctggcgccatcgtc
cagcggatcaaggcgctgcggtcccgccacggccatgacgtggagacgctgttcctggat
tgttcggacgcggagctggagcgccgttttgccgagacgcgccgccgtcacccgctggcc
gccgaccgccccgccgcccatggcatcgcccgcgaacgcgaactgaccgagccgctgcgc
cgctgggccaatcaggtgatcgacaccagcagcctgtccagcaatggattgcagcaggaa
atccgcaaccgcttctcccgcgaggggctgtcggacccggttctgacgatcatgtccttc
ggctattcgcgcggcgtgccgctgagcgccgacctgatgttcgacatgcgcttcctgcgc
aatccgcattgggaggacgcattgcggccgaaaaccggcctcgatcccgatgtcgccgcc
tatatcatggaagatccggcctatgaggaggcgatcgggcgcatcgaacaattgctgacc
ctgctgctgccgcgctatgcggggggcggaaaaagctacattaccgttgctttcggatgt
acggggggccgtcatcgctccgtccatgtgaccgaacgcgtcgccagatacttgcaagat
gcgggcttttcgcccacggtctcgcaccgcaatatggaatcagcgccccaggacgccctg
gagaagcgcggaccgggaggcccgaaagcgtaa
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