Sphingobium sp. TKS: K426_06625
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Entry
K426_06625 CDS
T04965
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht03030
DNA replication
spht03410
Base excision repair
spht03420
Nucleotide excision repair
spht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K426_06625
03410 Base excision repair
K426_06625
03420 Nucleotide excision repair
K426_06625
03440 Homologous recombination
K426_06625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spht03032
]
K426_06625
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_06625
Enzymes [BR:
spht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K426_06625
DNA replication proteins [BR:
spht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K426_06625
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K426_06625
NER (nucleotide excision repair)
GGR (global genome repair) factors
K426_06625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DprA_N
HHH_5
Ribosomal_60s
HHH_2
HAMP_N3
HHH
Transposase_20
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AMK22271
UniProt:
A0A126RJ32
LinkDB
All DBs
Position
1:complement(1302034..1304820)
Genome browser
AA seq
928 aa
AA seq
DB search
MPQNHLYLVDGSGYIFRAYHQLPPLTNKHGQPVGAVYGYTTMLWKLADELGKAEGPTHLA
VILDKGSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIA
SYTKAAVAAGWHVTIVSSDKDLMQLIQPGVDMYDTMKNERRGADYVMTKFGVQPEQLGDV
LALMGDSVDNVPGIPGIGPKTAAKLISEYGNLEAALEAAPSMKKSKMQENLIAHADMARL
SRRLVALHDAMDLPEPLDDLTLKGIPLEPLQAFLEHHGFKSLLARAGAPAAAVAVATAAA
AVTQATPPAAPVHEEEPPIDRSLYETVVTEEALDRWIAAAHAEGLVAVDTETDMLDCVSC
ALVGVSLAVGPNAACYIPVGHGGRDMFAEKPDQLPLALVLAKLKPLLEDDSVLKIGQNLK
YDITVLRRHGIEITPYDDTIVMSFDLDAGQSLAGHGMDEAAKVHLNHICISFKDVCGTGK
SQISFAEVPLDKATEYAAEDADVTLRLWKLFKTRVANEGATRVYELVDRPLVSVIAKMEH
EGIKVDREALSRLSAEFTAGIAALETEIHGLAGQPFAIGSTQQLGAILFEKMGYKGGKKG
KSGAYSTDVTILEQLKAQGAEIAGKILDWRQLAKLKSTYTDALQAQINRDTSRVHTSYSL
SGAQTGRLSSTDPNLQNIPIRTEVGRQIRHAFVAEPGNVILAADYSQIELRLAAHMADVP
ALKEAFANGEDIHAATAQQLFGEVNRDTRGRAKTINFAILYGISRWGLAGRLEISADEAQ
DMISRYYERFPGISLYITETIERARSRGYTETLFGRKTWFPRIKASVQHERQGAERAAIN
APIQGTSADIIKRAMARMGPALAAEGLHKVKMLLQVHDELVFELPKGDVGHASAVIRRIM
EGAAEPIVKLSVPLGVEIGHGPSWGAAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaatcatctctacctcgtcgacggcagcggctacatcttccgcgcctatcat
cagcttccgccgctcaccaacaagcatggccagcccgtcggcgcggtctatggctacacc
accatgctctggaagctggccgatgagttgggcaaagcagaaggcccaacccatctcgcg
gtgatactggacaagggcagccacaccttccgcaacgacatgtacgaccagtataaggcg
aaccgcccgcccgcgccggaagacctcgtcccgcaattcccgatgatccgcgacgccacc
cgcgccttctccctcccctgcatcgaggaagcgggtttcgaggccgacgacatcatcgcc
agctatacgaaagccgccgtcgcggcgggctggcatgtcaccatcgtcagctccgacaag
gatttgatgcagctcatccagcccggcgtcgacatgtacgacacgatgaagaatgagcgg
cgcggcgccgactatgtcatgaccaagttcggcgtccagcccgagcaattgggcgacgtg
ctggcgctgatgggcgacagcgtcgacaacgtgcccggcatccccggcatcggccccaag
accgccgccaagctcatcagcgaatatggcaatctggaagccgcgctcgaagccgcgcct
tcgatgaaaaagtcgaagatgcaggaaaatctcatcgcccatgccgacatggcgcgcctc
tcgcgccgcctcgtcgcgctgcacgatgcgatggacctgcccgaaccgctggacgacctg
acgctcaagggcatcccgcttgagccgttgcaggccttcctcgaacatcatggcttcaag
tcgctgctcgcccgcgcaggcgcgcccgccgccgccgtggccgtcgcgaccgcggccgcc
gccgtcacacaagcgacgccccccgccgccccggttcatgaggaagaaccgccgatcgac
cgcagcctctacgaaacggtcgttaccgaggaagcgctcgaccgctggatcgccgccgct
catgccgaaggtctggtcgccgtcgacaccgaaaccgacatgctcgactgcgtctcctgc
gcgctggtcggcgtcagcctcgccgtcggccccaacgccgcctgctacatccccgtcggc
catggcggaagggacatgttcgcggaaaagcccgaccagctccccctcgccctcgtcctt
gccaagttgaagccgctgctcgaagacgacagcgtcctcaaaatcggccagaacctgaaa
tatgacatcacggtcctgcgccgccatgggatcgagatcacgccctatgacgacaccatc
gtcatgagcttcgacctcgacgcgggccagagcctcgccggccacggcatggacgaggca
gccaaggtccacctcaaccatatctgcatcagcttcaaggatgtgtgcggcaccggcaag
agccagatcagcttcgcggaagtcccgctcgacaaggcgaccgaatatgccgccgaggac
gcggacgtcacactacgcctgtggaagctgttcaagacccgcgtcgccaatgaaggcgcg
acccgcgtttatgaactggtcgaccgcccgctcgtctccgtgatcgcgaagatggagcat
gaagggatcaaggtcgaccgcgaagccctgtcccgcctgtccgctgagttcaccgccggc
atcgccgcgctggaaacggaaatccatggcttggcgggccagcccttcgccatcggctcg
acccagcagcttggcgcgatcctgttcgagaaaatgggatataagggcggcaagaagggc
aagtccggcgcctattccaccgatgtcaccatccttgagcagttgaaggcccagggcgcg
gaaatcgctggaaaaatcctcgactggcgacagcttgccaagctcaaatccacctatacc
gatgcgctccaggcccagatcaacagggacaccagccgcgtccacaccagctacagcctg
tcgggcgcgcaaacaggccgcctgtcctcgaccgaccccaatctccagaacatccccatc
cgcaccgaagtcggccgccagatccgccacgccttcgtcgcggagccgggcaatgtcatc
ctggcggcggactatagccagatcgaactacgcctcgccgcccatatggcggacgttcca
gcactgaaagaagccttcgcgaacggtgaggacattcacgccgccacagcccagcaattg
ttcggagaggtcaaccgcgacacacgcggccgggccaagacgatcaacttcgcgatcctc
tacggcatcagccgctggggtctcgcgggacggctggagatcagcgccgacgaagcgcag
gacatgatcagccgctattatgagcgcttccccggcatcagcctctacatcaccgaaacg
atcgagagggctcgctcaaggggctataccgaaaccctcttcggccggaaaacctggttc
ccgcgcatcaaagcgtcagtccagcatgaacgtcagggcgccgaacgcgccgcgatcaac
gccccgatccagggcaccagcgccgacatcatcaagcgcgccatggcccgcatgggaccg
gcgctggcggcggaaggactgcacaaggtcaagatgctgctgcaagtgcatgacgaactg
gtgttcgaactgccgaaaggcgatgtcgggcatgccagcgccgtcatccgccgcatcatg
gaaggggctgcggagccgatcgtgaagctgagcgtcccgctaggcgtagaaatcggccac
ggcccgagttggggcgcggcgcactaa
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