Sphingobium sp. TKS: K426_07570
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Entry
K426_07570 CDS
T04965
Name
(GenBank) OOP-family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spht02000
]
K426_07570
Transporters [BR:
spht02000
]
Other transporters
Pores ion channels [TC:
1
]
K426_07570
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
Opacity
UBA_At5g58720
Motif
Other DBs
NCBI-ProteinID:
AMK22461
LinkDB
All DBs
Position
1:1486404..1487480
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AA seq
358 aa
AA seq
DB search
MRKLALAAVLATSALATPALARDNSWYVGIDSGVVLVEDQDITFTPGNGGAASNTLAGVD
YHKGWDGDANIGYDFGGFRLEAEAAYKRAKVDLDKSGFGGAASALSFMLNGLLDFGPDDG
LQGFVGGGVGVSRGKLANDTVNDSDTGFAWQAIAGVRYPLTNHVDVSLKYRFFNQDDIKL
VPAYTTIGGPAGSSVDTKLRTHSLLLGLTYNFGGEPAAPPPPPPPPPPPPPPPPPPPPPV
AECSPGPYIVFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADRSGSASYNVGL
SQRRADAVKAYISSKGIPDGVITTQAFGESNPRVETADGVRELQNRRVEITYGPGSGQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcttgccctcgcggctgtgcttgcgaccagcgccttggccaccccggctctg
gcgcgtgacaatagctggtatgtcggtatcgactccggcgttgtgctcgtcgaagatcag
gacatcactttcacccccggtaatggcggtgccgccagcaacacgcttgccggtgtggac
taccacaagggctgggatggcgatgccaatatcggctatgacttcggcggtttccgtctg
gaagccgaggccgcttacaagcgcgccaaggtcgatctggacaagagcggcttcggcggc
gcggcttcggccctgtcgttcatgctgaacggtttgctggacttcggtcccgatgacggc
ctgcagggcttcgtcggcggcggtgtcggcgtgtcgcgcggcaagctggccaatgacact
gtcaacgattctgacaccggcttcgcctggcaggcgatcgcgggcgttcgctatccgctg
accaaccatgtcgacgtctcgctgaagtatcgcttcttcaaccaggacgatatcaagctg
gttccggcctacaccaccatcggtggccccgccggttcgtcggttgacaccaagctgcgc
acccacagcctgctgctgggtctgacctacaacttcggtggtgaaccggctgctccgccg
ccgcctcccccgccgccgcctcccccgcctcccccgccgcctccgcctccgccgccggtg
gccgagtgcagccctgggccgtacatcgtcttcttcgaatgggacaagtcggacatcacg
cctgacgccgccaccattctggacaacgcggtttcggcctacagcaactgcggcagcgcc
caggtcatgctggcgggctatgcggaccgttcgggttcggcctcgtacaacgtcggcctg
tcgcagcgtcgtgctgacgccgttaaggcttacatctcgtcgaagggcatccccgatggc
gtgatcacgacccaggcgttcggtgaatcgaacccccgcgtcgaaaccgccgacggcgtt
cgcgaactgcagaaccgtcgcgtggaaatcacctacggtccgggttcgggtcagtaa
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