Sphingobium sp. TKS: K426_08075
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Entry
K426_08075 CDS
T04965
Name
(GenBank) Fis family two component sigma-54 specific transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spht02022
]
K426_08075
Two-component system [BR:
spht02022
]
NtrC family
Unclassified
K426_08075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_28
HTH_29
AAA_16
AAA_2
HTH_23
HTH_17
Xre-like-HTH
HTH_30
HTH_22
AAA_7
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AMK22562
LinkDB
All DBs
Position
1:1584590..1585954
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AA seq
454 aa
AA seq
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MSDMRPKLLIVEDDPGLQRQLRWAYEEYQLFIAGDREEAIEMLREQAPDVVTLDLGLPPD
PDGTSEGFATLAEILRIKPDTKVIVASGHGARESALHAISGGAYDFYQKPVDIDELGLIV
RRAFHVHALEKENARLAETAPEGGRVLGRLITAAPEMMKVARTIERVAGADVSVLLLGAS
GTGKELLAQGLHDASPRREGAFVAINCAAIPETLLEAELFGHEKGAFTGAIKTTPGKIEL
AQGGTLFLDEVGDIPLALQVKLLRFLQERVIERIGGRQPISVDTRIVCATHQNLEEMIAA
GSFREDLYYRLAEIVVRIPALRERPGDPALLARHFLNRFAKDMNPQVKGLAPDALAALDG
WGWPGNVRELENRMKRAVIMADGKHVTAADLDLDGDRAEGGDAVNLKAVREMADRRAIRR
AIARTDGNISGAAKVLGISRPTLYDLLKQYRMQN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatgcgaccgaaattgctgatcgtcgaggatgatccggggcttcagcggcag
ttgcgctgggcctatgaggaatatcagcttttcatcgcgggcgaccgcgaggaagcgatc
gaaatgctgcgcgagcaggcgcccgatgtggtgacgctggacctgggtctgccgcccgat
cccgacggcaccagcgagggtttcgccacgctggcggaaatcctgcggatcaagcctgat
acgaaggtcatcgtggcatccggccatggcgcaagggaaagcgcgctccatgccatttcg
ggcggcgcttatgatttctatcagaagccggtcgacatcgatgagctgggcctgatcgtc
cgccgcgccttccacgtccatgcactggaaaaggaaaatgcgcggctggccgaaaccgcg
ccggagggcgggcgcgtgctgggccgcctgatcaccgccgcgccggaaatgatgaaggtc
gcccgcaccatcgagcgggtcgcgggggcggacgtctccgtcctgctgctgggggcgagc
ggcaccggcaaggaattgctggcgcaggggctgcacgatgccagcccgcgccgcgagggt
gcctttgtcgcgatcaactgcgcggcgatcccggagacgctgctggaagcggaactgttc
gggcatgagaagggcgccttcaccggcgcgatcaagaccacgccgggcaagatcgaactg
gcgcagggcgggacgctgttccttgatgaagtgggcgacataccgctggctttgcaggtc
aagctgctgcgtttcctgcaggagcgggtgatcgagcggatcggcgggcgccagcccata
tcggttgacacgcggatcgtgtgcgccacgcaccaaaatttagaggaaatgatcgcggcg
ggcagcttccgcgaggatctttactaccggctggccgagatcgtggtgcgcattcccgcg
cttcgggagcggccgggcgatccggcgctgctggcgcggcatttcctcaaccgcttcgcc
aaggatatgaatccgcaggtcaagggtctcgcgcccgatgcgctggcggcgctcgatggc
tggggctggcccggcaatgtgcgtgagctggagaaccggatgaagcgcgctgtcatcatg
gcggatggcaagcatgtcaccgccgccgatctcgatctggacggggatcgggccgaaggg
ggtgatgcggtgaacctcaaggcggtacgggaaatggccgaccgccgcgcgatccgccgg
gcgattgcgcgaacggatgggaatatttcaggcgcggcgaaggtgctggggatcagccgg
ccgacgctctatgatttgttgaagcaatatcggatgcagaattga
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