Sphingobium sp. TKS: K426_09701
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Entry
K426_09701 CDS
T04965
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K426_09701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spht03019
]
K426_09701
03110 Chaperones and folding catalysts [BR:
spht03110
]
K426_09701
03029 Mitochondrial biogenesis [BR:
spht03029
]
K426_09701
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spht04147
]
K426_09701
Enzymes [BR:
spht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
K426_09701
Messenger RNA biogenesis [BR:
spht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K426_09701
Chaperones and folding catalysts [BR:
spht03110
]
Heat shock proteins
HSP60 / Chaperonin
K426_09701
Mitochondrial biogenesis [BR:
spht03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
K426_09701
Exosome [BR:
spht04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K426_09701
Exosomal proteins of other body fluids (saliva and urine)
K426_09701
Exosomal proteins of breast cancer cells
K426_09701
Exosomal proteins of colorectal cancer cells
K426_09701
Exosomal proteins of bladder cancer cells
K426_09701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
AMK22885
LinkDB
All DBs
Position
1:complement(1930275..1931900)
Genome browser
AA seq
541 aa
AA seq
DB search
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELADKFENMGVQMLREVASKTNDLAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGI
DLAVSAVVADLESHARKVSANNEIAQVATISANGDGEVGRILAEAMEKVGNEGVITVEEA
KSLATELEVVEGMQFDRGYLSPYFITNAEQLKVELDDPYILIHEKKLSNLQALVPLLEKV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTSGNV
VSEELGTKLENVTINMLGRAKKVTIDKDNTTIIDGVGTKADIDARVAQIRQQIDTTTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGVLPGGGVPLL
RALKALDSLKAANDDQQSGIDIVRRALRAPARQIAENAGEDGAWIVGKLLESPDYNWGFN
AATGEYQDLVQAGVIDPAKVVRTALQDAASVASLLITTEALVAEAPKEEKGAAMPAPAME
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtcaagtttgcgtcggacgcgcgcgatcgcatgctgcgcggcgtg
gatacgctcgcgaacgcggtgaaggtcacgctcggccccaagggccgcaacgtcgtgatc
gagaagagcttcggcgcgccgcgcatcaccaaggacggcgtcactgtcgccaaggagatc
gagcttgccgacaagttcgagaatatgggcgtgcagatgctgcgcgaggtcgcttcgaag
accaacgacctggcgggagacggtaccaccaccgccaccgtcctcgcgcaggcgatcgtc
cgcgagggctcgaaggccgtggccgcgggcatgaatccgatggatctcaagcgcggtatc
gatctcgcggtcagcgcggtagtcgccgatctcgaaagccatgccaggaaggtcagcgcg
aacaacgagatcgcgcaggtcgctacgatctccgccaacggcgacggcgaggtcggccgt
atcctcgccgaggcgatggagaaggtcggcaatgagggcgtgatcaccgtcgaggaagcc
aagagtctcgccaccgaactggaagtggtcgagggcatgcagttcgaccgcggctatctc
tcgccctatttcatcaccaacgccgagcagctgaaggtcgaactggacgatccctatatc
cttatccacgaaaagaagctctcgaacctgcaggcgctggtgccgctgctcgagaaggtc
gtccaatcggggcggccgctgctgatcatcgccgaggatgtcgagggcgaggcgctggcg
acgctggtcgtcaacaagctgcgcggcggcctcaaggtcgcggcggtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctcgaggacatcgccgtgctcaccagcggcaatgtc
gtcagcgaagaactcggcaccaagctcgaaaatgtcacgatcaacatgctcggccgggcg
aagaaggtcacgatcgacaaggacaacaccaccatcatcgatggcgtcggcaccaaggcg
gatatcgatgctcgtgtcgcccagatccgccagcagatcgacaccaccacatccgactat
gaccgcgagaagctgcaggagcgccttgccaagctggccggcggcgtcgcggtcatccgt
gtcggcggcgcgaccgaggtcgaggtcaaggagaagaaggaccgggtcgacgacgcgctc
catgcaacccgcgccgcggtagaggaaggcgttcttccggggggcggcgtcccgctgctc
cgggccctgaaggcgctcgacagcctcaaggccgcgaacgacgaccagcagtcgggcatc
gatattgtccggcgggcgctgcgcgccccggcccgccagattgcggagaatgccggcgag
gacggagcctggatcgtcggcaagctgctcgaaagcccagactataattggggcttcaat
gccgcgaccggcgaatatcaggatcttgtccaggcgggcgtgatcgatccggccaaggtt
gtgcgcaccgcgctgcaggacgcggcctcggtagcctcgctcctcatcacgaccgaagcg
ctggtcgccgaggccccgaaggaggaaaagggcgcggccatgcctgcgccggcgatggaa
tattga
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