Sphingobium sp. TKS: K426_11915
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Entry
K426_11915 CDS
T04965
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00220
Arginine biosynthesis
spht00240
Pyrimidine metabolism
spht00250
Alanine, aspartate and glutamate metabolism
spht01100
Metabolic pathways
spht01110
Biosynthesis of secondary metabolites
spht01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K426_11915 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
K426_11915 (carB)
00220 Arginine biosynthesis
K426_11915 (carB)
Enzymes [BR:
spht01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
K426_11915 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AMK23318
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All DBs
Position
1:2358324..2361659
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AA seq
1111 aa
AA seq
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MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPEF
ADATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNTALALFNDGTLEKFGVKMIGADA
EAIDKAEDRLKFRDAMDKIGLESARSRIAHSMEEALEALEFTGLPSIIRPSFTLGGTGGG
VAYNREEFKRIVMEGLDASPTTEVLIEESLLGWKEYEMEVVRDRNDNAIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIENDITGATPASFEPTIDYVVTKIPR
FAFEKFKGSEPLLGTAMKSVGEVMAIGRNIHESMQKALRGLETGLCGFNEVEHLVGAPKD
DIVAALAQPTPDRLLVAAQALREGLSVAEIHNIAKFDPWFLERIKEIVDAEAEILSNGLP
QDADGMRRLKAMGFSDKRLAYLALKSANLRGMERGIARGSGLIHEAVKAMTGGVTEDEVR
SLRHKLGVRPVFKRIDTCAAEFEAKTPYMYSTYEAPIFGQAENEAQPSDRKKVVILGGGP
NRIGQGIEFDYCCVHACFALSEVGYETIMINCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LNVEMSNGTLAGVIVQFGGQTPLKLAQALEDAGIPILGTSPDAIDLAEDRERFAALIDKL
KLKQPANGIARSREEAIAVANRIGYPVLMRPSYVLGGRAMEIVDGQAQLEEYIATAVQVS
GDSPVLIDQYLRDAVEVDVDALCDGEDVVVAGVLQHIEEAGVHSGDSACSLPPYSLSDEV
IAEIERQTEVLAHALSVRGLMNIQFAVKDGVVYLIEVNPRASRTVPFVAKAIGTPIAKIA
SRVMAGEKLKDLPKIDRNAISHIAVKEAVFPFARFAGVDPVLSPEMKSTGEVMGIDSDFA
TAFAKAQLGAGTVLPKSGTVFVSVKDSDKPVILPAVQKMAALGFTIIATGGTARYLEEQG
VAVQLVNKVAEGRPHIVDKITDGDVDLIFNTTEGWQSLKDSKAIRTSALRAKVSSFTTAA
ASVAAANAIEALRGHALEVRSLQSYYPLSQA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagaaccgacatctcctccatcctcatcatcggcgccggcccgatcatcatc
ggccaggcttgcgagttcgactattcgggtacgcaggcggtgaaggcgctcaaggaagag
ggctatcgcatcatcctggtgaattccaacccggccactatcatgaccgacccggaattt
gccgacgcgacctatgtcgagccgatcacgcccgaaatcgtggcgaagatcatcgagaag
gagcgcccggacgcggtgctgccgactatgggcggccagacggcgctcaacacggcgctg
gcgttgttcaacgacggcacgctggagaagttcggcgtcaagatgatcggcgccgacgcc
gaagccatcgacaaggccgaggatcgtctgaagttccgcgacgcgatggacaagatcggc
ttggaatctgcccgctcacgcatcgcgcacagcatggaggaggcgctggaggcgctggag
ttcaccggccttccctcgatcatccgccccagcttcacgctcggcggcaccggcggcggc
gtcgcctacaacagggaagagttcaagcggatcgtgatggaggggctggatgcttcgccc
accaccgaagtgctgatcgaagaatcgctgctgggctggaaagaatatgagatggaggtc
gtgcgggaccgcaacgacaatgccatcatcatctgctcgatcgagaatgtcgacccgatg
ggcgtccataccggcgactccatcacggtcgcgcccgcgctgacgctgaccgacaaggaa
tatcagatcatgcgcaacgcgagcatcgcggtgttgcgtgaaatcggcgtggaaacaggt
ggttccaacgtacagttcgcagtcaatccgaaggatggccgcctgatcgtcatcgagatg
aacccgcgcgtctcccgttcctcggcgctggcgtcgaaggcgaccggcttcccgatcgcc
aaggtcgcggcgaagctggccgtcggctacacgctggacgagatcgagaatgacattacc
ggcgcgacgcccgccagcttcgagccgaccatcgactatgtcgtgaccaagattccgcgc
ttcgcctttgagaagttcaaggggagcgagccgctgctcggcaccgcgatgaagtcggtg
ggtgaggtgatggccatcggtcgcaacatccatgaatcgatgcagaaggcgctgcgcggt
ctggaaaccggcctgtgcggcttcaatgaggtggagcatctggtcggtgcgcccaaggat
gacatcgtcgccgcgctcgcccagccgaccccggatcgcctgctggtcgccgcgcaggct
ctgcgcgaagggctgagcgtcgcggaaatccacaatatcgccaagttcgacccctggttc
ctggagcggatcaaggaaatcgtcgacgccgaagcggaaatcctcagcaacggcctgccg
caggatgcggatggcatgcgtcgcctcaaggccatgggcttctccgacaagcgccttgct
taccttgcgctcaagtccgccaatctgcgcggcatggagcgcggcattgcccgtggttcg
ggcctgatccacgaagcggtcaaggccatgaccggcggcgtcaccgaggacgaagtgcgg
agcctgcgccacaagctcggcgtgcgtccggtcttcaagcgcatcgatacctgcgccgcc
gagttcgaggcgaagacgccttacatgtactcgacctacgaagccccgatcttcgggcag
gccgagaatgaggcgcagcccagcgaccgcaagaaggtcgtgatccttggcggcggtccc
aaccgcatcgggcagggcatcgagttcgactattgctgcgtccacgcctgcttcgcgctc
agcgaagtcggctatgagacgatcatgatcaactgcaacccggaaacggtgtcgaccgac
tatgacacgtccgaccgcctctatttcgagccgctgaccgccgaagacgtccttgaaatc
ctgaacgtcgaaatgtcgaatggcacgctggccggggtcatcgtccagttcggcggccag
acgccgctcaagctggcgcaggcgctggaggatgcgggaatcccgatcctgggcacctcg
ccagacgccatcgatcttgccgaagaccgcgaacggttcgccgcgctgatcgacaagctc
aagctcaagcaacccgccaacggcatcgcccgcagccgcgaggaggcgatcgcggtcgcc
aaccgcatcggttatccggtgctgatgcgcccgtcctacgtccttggcggccgcgccatg
gagatcgtcgacggccaggcccagcttgaggaatatatcgccaccgccgttcaggtgtcg
ggcgactcgccggtgttgatcgaccaatatctgcgcgatgcggtcgaggtcgacgtggat
gccctgtgcgacggcgaagatgtcgtggtcgccggcgtgctccagcatattgaagaggcg
ggcgtccattcgggcgacagcgcctgctcgctgccgccctatagcctgtcagacgaggtg
atcgcggaaatcgagcgccagaccgaagtgctggctcatgccctgtcggtgcgcggcctc
atgaacatccagttcgcggtcaaggacggtgtggtctatctgatcgaggtcaacccgcgc
gccagccgcaccgtgcccttcgtcgccaaggcgatcggcacgcccatcgccaagatcgcc
tcgcgggtcatggctggcgagaagctcaaggatctgccgaagatcgaccgcaacgcgatt
tcgcatatcgcggtcaaggaggcggtattccccttcgcgcgctttgccggtgtcgacccc
gtattgtcgccggaaatgaagagcaccggcgaagtcatgggcatcgacagcgatttcgcg
acggccttcgccaaggcgcagctcggcgcgggcaccgttctgcccaagagcggcacggtg
ttcgtgtcggtcaaggacagcgacaagccggtgatcctgcccgccgtccagaagatggcg
gcgcttggcttcaccatcatcgcgaccggcggcaccgcccgctatctggaagagcagggc
gtcgccgtacaattggtgaacaaggtggcggaaggccgtccgcacatcgtcgacaagatc
accgacggcgacgtcgacctgatcttcaacacgaccgagggctggcagtcgctcaaggac
agcaaggcgatccgtaccagcgcgttgcgcgccaaggtctccagcttcaccacggcggcg
gccagcgtcgcggcggcgaacgcgatcgaggctcttcggggccatgcccttgaagtgcga
tcgctccagtcctattatcccctgtcgcaagcctga
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