Sphingobium sp. TKS: K426_12225
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Entry
K426_12225 CDS
T04965
Name
(GenBank) o-succinylbenzoate--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00061
Fatty acid biosynthesis
spht00071
Fatty acid degradation
spht01100
Metabolic pathways
spht01212
Fatty acid metabolism
spht02024
Quorum sensing
spht04146
Peroxisome
Module
spht_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K426_12225
00071 Fatty acid degradation
K426_12225
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K426_12225
09145 Cellular community - prokaryotes
02024 Quorum sensing
K426_12225
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spht01004
]
K426_12225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spht04147
]
K426_12225
Enzymes [BR:
spht01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K426_12225
Lipid biosynthesis proteins [BR:
spht01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K426_12225
Exosome [BR:
spht04147
]
Exosomal proteins
Exosomal proteins of breast milk
K426_12225
Exosomal proteins of breast cancer cells
K426_12225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMK23380
UniProt:
A0A126RMB2
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All DBs
Position
1:complement(2432088..2433623)
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AA seq
511 aa
AA seq
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MSLSLGGVDPARRDQLALADERVTYDWHQLDELLNRAANALNGLDLTERRVAVFAPNSAE
TVIAYVACLEAGISSVPVSFHLTPSEAAYILKDSGAVALLVGPETMEAGLAAAAEAGVKT
VIGWRCPDREDVIHWEDWIAAASTAEPDPEVPPLPHLHYTSGTTGRPKATETPPQYFPRA
ATVKALAEAIRSKITPSPGIAVGPLYHTGPLGMARNVFGGMSLITVEHFDAEKTLALIEK
YKVAGSVMVPTHFQRMLALPEDIRTKYDVSSIQRLAHTGAACPRAVKQAMIDWFGPVLVE
AYGGTEAGSTTYITSQEWLERPGSVGKALPPFETEIYGEDGQLLGPNEVGQVYFRDTSGH
GIVYRGDPEKTAAAHIAPGVFTLGEMGYVDAEGYLFITDRVSDMIVSGGVNIYPAESEHV
LLRHPKVADVAVVAAPNAEMGEEARALVIPKDADDPPSPQELNAFCRANLAGYKCPRGYE
MVDDIGRTVMGKVNKKALRQRFWPSDRTIGG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgagccttggcggggtcgatcccgcgcgtcgtgaccaactcgcccttgccgat
gagcgggtgacttatgactggcatcagttggatgagctgctcaaccgggcggccaatgcg
ctcaatggcctcgacctgaccgagcggcgagtggcggtgttcgcgcccaacagcgccgag
acagtgatcgcctatgtcgcctgtctggaggcgggcatttccagcgtgccggtgagcttt
cacctgacgccttcggaggccgcctatattctgaaggacagtggcgcggtggcgctgctg
gtcgggccggagacgatggaggccgggcttgccgcagccgctgaggctggcgtcaagacg
gtgatcggctggcgctgccctgatcgtgaagatgtcatccattgggaggactggatcgcg
gcggcttcgaccgctgaacccgatcctgaggtgccacctttgccgcatctccactatacg
tccggcaccacgggacgacccaaggccaccgagacgccgccgcaatatttcccgcgcgct
gccacggtgaaggctctggccgaagcgatccgatcgaagatcacgccttcgcccggcatt
gccgtggggccgctttatcataccgggccgctcggcatggcgcgcaatgtctttggcggc
atgagcctgattaccgtcgagcatttcgatgcggaaaagacgctggcactgatcgagaaa
tataaggtcgcaggatcggtgatggtgccgacgcatttccagcggatgctggctctgccc
gaagacatccgcaccaaatatgatgtgtcgagcatccagcggctcgcccataccggcgcg
gcctgtccgcgtgcggtgaagcaggcgatgatcgactggttcgggccggtgctggtcgag
gcctatggcgggaccgaggcgggatcgaccacctacatcacctcgcaggaatggctggag
cggccggggtccgtcggcaaggcgctcccgcctttcgagacggagatttatggcgaggat
gggcagttgctggggccgaacgaagtcggacaggtctatttccgcgacaccagcggccat
ggcatcgtctatcgcggcgatcccgaaaagacggccgccgcccatatcgcgccgggcgtc
tttacgctgggcgagatgggctatgtcgatgcggagggctatctcttcatcaccgaccgc
gtgtccgacatgatcgtaagcggcggggtgaacatctatcccgccgagtccgagcatgtg
ctgctgcgccatcccaaggtggcggatgtggccgtggttgccgcacccaatgcggaaatg
ggcgaggaagcgcgggcgctggtcattcccaaggatgcggacgatccgccgagtccgcaa
gaactcaacgccttctgccgcgccaacctcgccggttacaaatgcccgcgcggttacgag
atggtggatgatatcggccgcaccgtcatgggcaaggtcaacaagaaggcgctgcgccag
cgcttctggccttctgatcgcaccatcgggggttga
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