Sphingobium sp. TKS: K426_12510
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Entry
K426_12510 CDS
T04965
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_12510
Enzymes [BR:
spht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K426_12510
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K426_12510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
DUF2800
Motif
Other DBs
NCBI-ProteinID:
AMK23437
UniProt:
A0A126RMS5
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All DBs
Position
1:2495527..2498970
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AA seq
1147 aa
AA seq
DB search
MAATMAKKAKALQPLAGAQAQAAAPDAHVWLSASAGTGKTHVLTARVFRLLLQGVRPENI
LCLTFTKAGAAEMADRIHDRLAAWVQMEEGDLFHDLEALSEESGPEARDRARRLFAEVLE
STGGGLRIQTIHGFCQQLLTAFPLEADLPPGFRPLDQREQATLARQTLADMVVVAQQQGD
DALIEALQALSLRMGEGGAENFLLRCAARLDALKALPEDIAPWLLRELELPEGDIDAHIA
TQCADDLFDMRTLIWIAQANADWGTGRALERCDRIARWRNLDPAARAATLTDLHVVWAKA
DGELISTAKGWAPPVDGYGDAIARIHERCAELLGLRLRAAYAALLAKALHAGRVYARAYA
QAKQLAGAVDFDDLIANTAQLLSQPGIADWIRYKLDQRIDHILVDEAQDTNVSQWQIVGA
LAAEFFAGEGAKGDKVRTIFTVGDFKQAIFGFQGTSPESFRAAQIVFQRHAEDASHPFYD
LSLQHSFRSTPAVLDVVDRTIATLRAERFGLEPGEVRHISANRFPGEVLLWKPVVAGLSD
EAEGEEDWAADQERVLAQTIARQIRQRIDDGLMLESRGRPVTAGDFMILVRRRSELARLI
VARLYEEKVAVAGIDRLRLNAPLAVRDLLAALRFAVQPEDDLNLAALLVSPLIGWTQDAL
MDRLINRRAGLWQHLTQTLDAALLEPLRQLLGQADFTTPYRYLEAILSGPMDGRRRLIER
LGSEAADPIEELLNAALAFENDDYPSLQRFIDWFDRGEVEIVRDAAAQGDSLRLLTVHGA
KGLQAPIVILADACLDPDAGNRADSLEWNGLPIIAPRKAERQGAIGQVAEEASAVERAEH
WRLLYVALTRAEERLVVAGSLGPRAKGEVKPESWYAAVEGALISLEAEWEADPLWGARRS
WRGSEILPSKPAEHGIAENQAVHNEPSWLRRPAPAEARPPRPLAPSAAVEDDVPYPPPTP
AMRDAAERGRWLHRLFERLADVPPDSRRLRADKWLAQQGLADPARRHDVIKQTLRVIEDP
QFAGLFGPDALAEAPIAAVVGEAVIAGTVDRLRISDGLVQLIDFKTGRISPLVVEEVPLA
HVRQMAAYAAALQVIFPDRRIEAGLLYTAAPRLITLPPELLARHKPAFPSAQENLPLPPV
ETDATPS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgacgatggctaaaaaggccaaggctctgcaaccgctggccggcgcccaggcg
caggccgccgcgcccgacgcccatgtgtggctgtcggcatcggcgggcacgggcaagacc
catgtgctgaccgcgcgcgttttccgtctgctgctgcaaggggtgcggccggaaaatatc
ctctgcctgacctttaccaaggcgggcgcggcggagatggccgatcgcatccatgaccgg
ctcgccgcctgggtgcagatggaggaaggcgatctcttccacgatctggaggctttgagc
gaggagtccggcccggaagcccgcgaccgggcgcgccgcctttttgccgaagtgctggag
tcgactggcggcggcctgcgcatccagacgattcacggcttttgtcagcaattgctgacc
gcttttccgctggaggccgacttgccgcccggtttccggccgctcgatcagcgcgagcag
gcaacactggcgcgccaaacgctggccgacatggtggtggtcgcacaacagcagggcgac
gatgcgctgatcgaagctttgcaggcgctcagcctgcgcatgggcgagggaggcgcggag
aatttcctgctgcgctgtgcggcccggctggacgcgctcaaggccttgccggaggatatc
gcgccctggctgctgcgggaactggaactgcccgaaggcgatatcgacgctcatatagcc
acacagtgcgcggacgacctgttcgatatgcgcacgctgatatggatcgcgcaggccaat
gcggattggggcacgggtcgggcgctggagcgctgcgaccggatcgcgcgctggcggaat
ctcgatccggcggcgcgggcggccacgctcaccgatctccatgtcgtctgggcgaaggcc
gatggcgaactgatctctaccgccaaaggctgggcgcccccggtggatggctatggggac
gccattgcacgcatccatgagcgttgtgccgaactgttgggcctcaggctccgcgccgcc
tatgccgctttgctcgccaaggctctgcacgccgggcgggtttatgcccgcgcctatgcc
caggccaagcaacttgcgggcgcggtcgatttcgacgacctgatcgccaacaccgcgcaa
cttctgtcccagcccggcattgccgactggatacgctacaagcttgatcagcgcatcgac
catatattggtggacgaggcgcaggataccaatgtcagccagtggcagatcgtcggcgcg
ctggcggcggagtttttcgcaggcgaaggggcgaagggcgacaaggtccgcaccatcttc
accgtgggcgatttcaagcaggcgatcttcggttttcagggcaccagccccgaatctttc
cgggccgcgcagatcgtcttccagcgccatgccgaggatgcgagtcatcctttttacgac
ctctcgcttcagcacagcttccgctcgacgcccgcggttctggatgtggtcgaccgcacc
atcgcgacgctgcgcgccgagcgtttcgggctggaaccgggcgaagtccggcatatcagc
gcgaatcgcttccccggcgaagtgctgctctggaagcctgtggtcgcgggcctgtccgac
gaggccgagggggaagaggattgggccgccgatcaggagcgcgttctggcgcaaaccatt
gcgcgccagatcaggcagcggatcgatgacgggctgatgctggaaagccggggccgcccg
gtgacggcgggcgacttcatgatcctggtccgccgccgcagcgaactggcgcggctgatc
gtggcccggctctatgaggaaaaggtcgcggtggcgggcatcgaccgcctgcggttgaac
gcgccgctggcggtgcgcgatctgctggcggcgctgcgctttgccgtgcagccggaggat
gatctgaacctcgccgcgctgctggtctcgccgctgatcgggtggacgcaggacgcgttg
atggaccgcctcatcaaccggcgcgccgggctgtggcagcatctgacgcagacgctggac
gctgcgctgctggagcctttgcgccagttgctggggcaggcggacttcaccaccccctat
cgctatctggaggcgatattgtccggcccgatggatggccgccgccgcctgatcgagcgc
ctgggctccgaagccgccgatccgatcgaggaattgctgaacgccgcgctcgccttcgag
aatgacgattatccctcgctccagcgcttcatcgactggttcgaccggggcgaggtggag
atcgtacgcgatgccgccgcgcagggcgattcgctgcgtctgctgacggtgcatggcgcc
aagggtttgcaggcgcccatcgtcattcttgctgatgcctgccttgatccggatgcgggt
aatcgcgcggattcgctcgaatggaacgggttgccgatcatcgcgccgcgcaaggcggaa
cggcagggcgcgatcggacaggtggcagaggaagcgagcgccgtcgaacgcgccgagcat
tggcgcctgctctatgtcgccctgacgcgagcggaagaaaggttggtcgtcgccggatcg
ctcggacccagggccaagggggaggtcaagcccgaaagctggtatgcggctgtcgaaggt
gcgctgatctcgctggaggcggaatgggaggccgatccgctctggggtgcgcggcgcagt
tggcgcgggagtgagattctcccctcgaaaccggcggaacatggcatcgcggaaaatcag
gcggttcacaacgagccatcctggttgcgtcgtcccgctccagcggaagcgcggccgccg
cgtcccttggcgccgtctgccgctgtggaggatgatgtgccctatccgccgccgacccct
gcgatgcgggatgcggccgagcggggccgctggttgcatcggctgttcgagcggctggcc
gatgtgccgcccgacagccgccgcctgcgtgccgacaaatggctggcgcaacagggtctt
gccgatcctgcgcggcggcatgacgtcatcaagcagacgttgcgcgttatcgaagacccg
caatttgccgggcttttcggaccggatgcgctggccgaagcgccgatcgccgctgtcgtg
ggcgaggcggtgatcgccggaaccgtcgaccggctgcgcatcagcgacggtctggtgcaa
ctgatcgatttcaagacaggccgcatatcgccgcttgtcgtggaggaggttccgttggcc
catgtccggcagatggcggcctatgccgccgcgttgcaggtgatcttccccgatcgcagg
atcgaggcggggctgctctacaccgctgcgccccggctcatcaccctgccgcccgagctg
ctggcgcggcacaagccggcctttccgtccgcgcaggagaatttgccgcttccgcccgtt
gagaccgacgccactccgtcctaa
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