KEGG   Sphingobium sp. TKS: K426_12705
Entry
K426_12705        CDS       T04965                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
spht  Sphingobium sp. TKS
Pathway
spht02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spht00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K426_12705
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spht02044]
    K426_12705
Secretion system [BR:spht02044]
 Type IV secretion system
  Trb secretion system protein
   K426_12705
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: AMK23474
LinkDB
Position
1:complement(2535516..2536736)
AA seq 406 aa
MTDSHDAPAEARSEPQAARPDPAAFQLRGHPPRVMRLSRKALAVVGVAAGLGIGGSLIYA
LRPPGDRAAQELYNTDSRATSETITSGPRDYAQAPRLGPPLPGDLGRPIVSAQQRGEDVP
VPPIGARPGPPDPRAQAAEAARQRAAQERDAARTSSVFLGSGGPRAGAEPVSTPGLPAPS
AQEPTQQEAQGDQAGKRAFMAPAANQRTVSVERLTAPASPNLVQAGSIIPAALITGVRSD
LPGQITAQVTANVYDSPTGRILLIPQGARLIGEYDSKIAAGQTRVLLAWDRLIMPDGRSV
VLERQPGADGAGFAGLQDRVNQHWGNLLKAAAISTLLGAGAELGADDEDNLTRALRRGSQ
DTINQTGQQIVRRQLNVQPTLTIRPGHPLRVVLTRDLVLEPVGATR
NT seq 1221 nt   +upstreamnt  +downstreamnt
gtgaccgacagccacgatgcgccagccgaagcgcggtcggagccgcaggccgctcgcccc
gatcccgccgcgttccagcttcgcggccatccgccccgcgtcatgcggctgtcccgcaag
gcgctcgccgtcgtcggcgtggccgccgggctcggcataggtggttcattgatatacgcg
ctacggccgccgggcgatcgagccgcgcaggaactctacaacaccgacagtcgcgctacg
tccgagacgatcacgtccggcccgcgcgattatgcgcaggcgccccggctaggcccgcca
ctccccggcgacctcggccgcccgatcgtgtcggcgcagcagcgcggcgaggacgtgccc
gtgccgccgatcggcgcgcggccaggtccgcccgatccgcgcgcgcaggccgcggaggcg
gctcggcaacgtgcggcgcaggagcgcgatgcggcccgcaccagctcggtgttcctcggc
agcggcggcccgcgcgcgggtgcggagccggtctcgacgccgggcttgccggcgccttcc
gcgcaggaaccgactcagcaggaagcgcaaggcgatcaggccggcaagcgcgccttcatg
gcgccggcggccaaccagcgcacggtcagcgtcgagcgactgaccgcgccggcatccccg
aacctcgtgcaggccggcagcatcatcccggccgcgctcatcaccggcgtccgttcggac
ctgcccggccagatcaccgcccaagtgacggccaacgtctatgatagcccaaccggccgc
atcctgctcatcccgcagggcgcccgcctgatcggcgagtatgacagcaagatcgccgcc
gggcagacccgcgtgctgctcgcctgggatcggctcatcatgccggacggccgctcggtc
gttctcgagcgccagcccggcgccgacggtgcaggcttcgcgggcctacaggaccgcgta
aaccagcattggggcaatctgctcaaggccgcggccatctcgaccctgcttggcgcgggc
gccgagctaggcgcggacgatgaagacaacctgacccgcgcgttgcgacgcggctcgcag
gacaccatcaatcagaccggccagcagatcgttcggcggcagctcaacgtgcagccgacg
ctcacaatacgaccggggcatcctttgcgcgtggttctcacccgcgacctggtgcttgaa
ccggtgggagcaacaagatga

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