KEGG   Sphingobium sp. TKS: K426_12750
Entry
K426_12750        CDS       T04965                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
spht  Sphingobium sp. TKS
Pathway
spht02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spht00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K426_12750
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spht02044]
    K426_12750
Enzymes [BR:spht01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     K426_12750
Secretion system [BR:spht02044]
 Type IV secretion system
  Trb secretion system protein
   K426_12750
SSDB
Motif
Pfam: T2SSE Zeta_toxin FtsK_SpoIIIE AAA_16 TrwB_AAD_bind ABC_tran AAA_19 nSTAND3 AAA_22 RsgA_GTPase cobW AAA_29 DUF815 CbiA DUF87 ResIII MMR_HSR1 AAA_10 AAA_30 Septin ATPase TsaE DEAD AAA_7 P-loop_TraG Sigma54_activat SLFN-g3_helicase GTP_EFTU ABC_ATPase MobB IstB_IS21 AAA_28 NACHT AAA_25 DUF5914 SRP54 AAA_23 AAA_11 ATP_bind_1 Viral_helicase1 UvrD-helicase NTPase_1
Other DBs
NCBI-ProteinID: AMK23483
UniProt: A0A126RI72
LinkDB
Position
1:complement(2543907..2544893)
AA seq 328 aa
MTVHPIRSEAKSRGARMLRTALGPSIAGWLDDPAVIEVMLNPDGRLWLDRLGEGISDTGE
LLSAADGERIVRLVAHHVGVEVHAKSPRVSAELPEGGERFEGLLPPVVAAPAFAIRKPAV
AVFTLDDYARAGIMSAEEAEALRHGVETRANILVAGGTGAGKTTLVNALLAEVAKTNDRI
VLIEDTRELQCAAPNLVAMRTKDGVVSLSELVRSSLRLRPDRIPIGEVRGAEALDLIKAW
GTGHPGGVGTIHAGTALGALRRMEQLIQEAVVTVPRALIAETIDLIAVLVRDAHGRRLTE
LARVDGLDPATGDYRLAPFTTPKPGDLP
NT seq 987 nt   +upstreamnt  +downstreamnt
ttgaccgtccacccgatccgatccgaggcgaaatcacgcggcgcgcggatgctgcgcacc
gcgctcgggccgtcgatcgcgggatggctcgacgaccccgccgtcatcgaagtgatgctg
aacccggacggccggttgtggctcgatcggctcggcgaaggcatcagcgacaccggcgag
ctgctcagcgcggcggacggcgagcgcatcgtccgcttggtcgcgcatcacgtcggcgtt
gaggttcacgctaagtccccgcgcgtttcggccgagctgcccgagggcggcgagcgattc
gagggtctattgccacccgtcgtcgccgcgccggccttcgcgatccgcaagcccgcagtc
gcggtgttcacgctcgacgactatgcgcgtgccggcatcatgtcggcggaggaggccgag
gcgctgcgccacggcgtcgagacccgcgccaatatccttgtcgcgggcggcaccggcgcg
ggcaagaccacgctggtcaacgcgctgctggccgaggtcgccaagaccaacgaccgcatc
gtcctgatcgaagacacgcgcgagctgcaatgcgccgcgccgaacctcgtcgccatgcgc
accaaggacggcgtggtgtcgctgtccgagctggtccgctcgtcgctgcgccttcggccc
gaccgcatcccgatcggcgaggtgcgcggcgccgaagcactcgacctcatcaaagcctgg
ggcaccggccatcccggcggggtcggcacgatccacgcggggacagcgctcggcgcgctg
cgccgcatggagcagctcatccaagaagccgtcgtgacggttccgcgcgcgctgattgct
gagacgatcgacctgatcgccgtgctggtccgcgatgcgcacggacgccggctgaccgaa
ctggcccgcgtcgatgggctcgaccccgcgaccggcgactaccgcctcgcacctttcacc
acccccaagcccggagacctgccatga

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