Sphingobium sp. TKS: K426_12865
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Entry
K426_12865 CDS
T04965
Name
(GenBank) Site-specific recombinase
KO
K06400
site-specific DNA recombinase
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
K426_12865
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Zn_ribbon_recom
Recombinase
Zn_ribbon_Top1
DUF1421
Motif
Other DBs
NCBI-ProteinID:
AMK23506
UniProt:
A0A126RNB8
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Position
1:2563017..2564642
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AA seq
541 aa
AA seq
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MTVPLRAALYLRVSTARQAEHDVSIPDQRKQGEAYCLSRGLELVDTFVEAGASATNDRRP
EFQRMIEAGTSKPATFDVVVVHSFSRFFRDHFELEFYVRKLAKNGVKLLSITQEMGDDPM
HVMMRQIMALFDEYQSKENAKHVLRALKENARQGFWNGSLPPIGYRVVAAEQRGAKTKKK
LEIDPLHADTVRLAFKLALEGDGTSGPMGVKTITKHLNESRIFTRDGGRWGIGTVHRMLT
RATYAGRHEFNKRGKSKELKPAAEVIAVEVPAIIDQAMFDAVQAHLKARSPKVAHPQVVG
GPTLLTGLIHCGKCGGAMTIRTGKSGRYRYYTCSMKARQGATACEGMTVAMERLDDLVAN
HLAERLLDPDRLEDVLSEVLDRRQDRSDRRREHIAELNKRAAETELRLKRLYDAIESGVA
DLDDPALKDRIDGLKATRDQARADAERASALLVSSAQQAITPTMLRDFASTARQRIRLEG
GGYRRDHLRALAQRVEVDREEVRIMGSKSNLLRVLAANGVASAAGGVPTVVPKWRTGCPR
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgccgctacgcgccgccctctatctgcgcgtctcgacggcgcggcaggccgag
cacgacgtctccattcccgatcagcgcaaacagggcgaagcctattgtctctcgcgcgga
ctggaactggtcgatacgttcgtggaggcaggcgcatccgccaccaacgaccgccggccc
gagttccagcgcatgattgaggccggaacgagcaagcccgcgacattcgacgtggttgtc
gtccacagcttctcgcgattcttccgcgaccatttcgagctggagttctacgtccgcaag
ctcgccaagaacggcgtgaagctgctctccatcacgcaggagatgggcgacgatccgatg
cacgtcatgatgcgccagatcatggcgctgtttgacgagtatcagtcgaaggagaacgcc
aagcacgtcctgcgcgcgctcaaggagaatgcgcgtcagggcttctggaatggctcgctg
ccgccgatcggctaccgcgtcgtcgctgccgaacagcgcggcgcgaagaccaagaagaag
ctggagatcgacccgcttcacgccgacacggtgcggctggcgttcaagctggcgctggaa
ggcgacggcacgtccggcccgatgggtgtcaaaacgatcaccaagcatctcaacgagagc
cgcatcttcacccgcgacggcgggcgctggggcatcggcacggtgcatcggatgctgacg
cgcgctacctatgcggggcggcacgagtttaacaagcgcggcaaaagcaaagaattgaag
cctgccgccgaggttatcgctgtcgaggttccagcgatcatcgaccaggcgatgttcgat
gcggtgcaggcgcatctgaaggcgcgcagcccgaaggtcgcgcatccgcaagtcgtcgga
ggcccgacgctgctaacggggctgatccactgcggcaagtgtggcggggcgatgacgatc
cgcaccggcaagagcggtcgctatcgctattacacctgctcgatgaaggcgcgacaggga
gcgaccgcgtgcgagggcatgaccgtggcaatggagcggctggacgatctcgtcgccaat
catctggcggaacggctgcttgatcccgatcgacttgaggacgtgctgtcggaagttctg
gaccgccgacaggaccgatccgaccggcgccgcgagcatatcgccgagcttaacaagcgc
gctgcggagacggagctgcgcttgaagcggctttatgacgcaatcgaaagtggagtcgcc
gatctcgatgatccggcgctcaaggatcgcatcgacggattgaaggcgacccgcgatcag
gcgcgagcggacgccgagcgcgcctcagcgttgctagtaagctcggcgcagcaagcgatc
acaccgacgatgttgcgcgacttcgcctcgaccgcgcggcaacgtatccgactggagggc
ggtggctaccggcgcgatcatctgcgtgcgctcgcgcagcgggtggaagtcgatcgcgag
gaagtccgcatcatgggctcgaagagcaacctattgcgggtgctcgccgctaacggcgta
gcctcggcggcgggcggagtgcccaccgttgttccgaagtggcggacagggtgtccccga
aactag
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