Sphingobium sp. TKS: K426_13050
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Entry
K426_13050 CDS
T04965
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spht03032
]
K426_13050
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_13050
Enzymes [BR:
spht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K426_13050
DNA replication proteins [BR:
spht03032
]
Prokaryotic type
DNA Topoisomerases
K426_13050
DNA repair and recombination proteins [BR:
spht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K426_13050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF2835
Motif
Other DBs
NCBI-ProteinID:
AMK23543
UniProt:
A0A126RMR6
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All DBs
Position
1:2599428..2602121
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AA seq
897 aa
AA seq
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MTDETALADPSDISPISIVEEMKASYLDYAMSVIVARALPDVRDGLKPVHRRILFSANES
GFHHNKPYRKSARIVGDVIGKYHPHGDSSIYDALARMTQDWAMRVPLIDGQGNFGSMDPD
PPAAMRYTEARLAKVTTALLEDLDKDTVDFQPNYDASESEPQVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVIRACLAYIDNSGITIDELIQIVPGPDFPTAPLILGQSGARSAYHT
GRGSIMMRSRYKIEEGRGDRQSIVLTAIPYQVGKNGLVEKIAEAAKDKRIEGISDIRDES
NREGVRIVMDLKRDATPEVVLNQLWRNTPAQSSFPANMLAIRGGRPELLNIRDIIEAFVR
FREEVITRRTKYELNKARDRAHILLGLVIAVTNLDEVVRIIRGSASPAEARETLLARDWP
VAEIAPYLKLVEAIEAEVSGDTYRLSDTQVRAILDLRLHRLTALGRDEIGNELAELAAAI
AEYLAILGDRVKLYAVMREEFEAIERDFATPRLSEITAAADGIDDEDLIEREEMVVTVTV
QGYIKRTPLESFRAQARGGKGRSGMTTKDEDAITELFVTSTHTPVLFFSTAGKVYRLKVW
RLPEGGPATRGRPMVNLLPLGPGETIQTVLPLPEDEESWKDLHVMFATANGTVRRNSMDA
FANIPSNGKIAMRFDDDSTDRLIGVALLSEEDDVLLATRQGKAIRFQATDVREFQSRTST
GVRGMTLKKDDEVISLSILTRSGANQEERDDYLRFAPWKAEKEGSPQMSAERFAELQAKE
QFILTVCANGYGKLSSAYDYRRTGRGGQGITNIDNIGRNGPVVASFPARHGDHLMLVTDQ
AKLIRMGLESLRVIGRSSAGVRLFNVSDDEHVVSAAKIEESDEAEEAVETGSETGEA
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgagactgccctcgccgacccttcggacatcagccccatctccatcgtggag
gagatgaaggcgagctatctcgactatgccatgtcggtcatcgtcgcccgcgccctgccg
gacgtgcgcgacggtttgaagccggtgcaccgccgcattctcttttcggccaacgagtcc
ggctttcaccataacaagccctatcgcaagtcggcgcgcatcgtcggtgacgtgatcggt
aaatatcacccccacggcgacagttcgatctatgacgccctggcgcgcatgacgcaggat
tgggcaatgcgcgtgccgctgatcgatggccagggcaatttcggttcgatggaccccgat
ccgccggccgccatgcgttacaccgaagcgcgcctggccaaggtgacgaccgccctgctc
gaagatctcgacaaggacacggtcgacttccagcccaactatgacgcttcggaaagcgaa
ccgcaggttctgccggcacgcttcccgaaccttctggtcaacggcgcgggtggcatcgcg
gttggcatggcgaccaacatcccgccgcataatctgggcgaagtgatccgcgcttgcctc
gcctatatcgacaatagcggcatcaccatcgacgaactcatccagatcgtccccggcccc
gatttcccgaccgccccgctgatccttggccagtcgggcgcccgcagcgcctatcatacc
gggcgcggttcgatcatgatgcgctcgcgctacaagatcgaggaagggcgcggcgaccgc
cagtcgatcgtgctgaccgccatcccctatcaagtcggcaagaacggcctcgttgaaaag
atcgctgaagccgccaaggacaagcggatcgagggcatcagcgacattcgcgacgaatcg
aaccgcgaaggcgtccgcatcgtcatggacctgaagcgcgatgccacgccggaagtcgtg
ctcaaccagctctggcgcaacacgcccgcccagtcgagcttcccggccaatatgctcgcc
attcgcggcggccgcccggaactgctcaatatccgcgacatcatcgaggcgttcgtccgc
ttccgcgaagaggtcatcacccgccggacgaaatatgaactcaacaaggcccgcgaccgc
gcgcatatcttgctgggcctcgtcatcgcggtcaccaatctcgatgaagtcgtccgcatc
atccgtggatcggcaagtcccgccgaagcgagggaaaccctgctcgcccgcgactggccg
gtggcggagatcgccccctatctgaagctggtcgaagccatcgaggccgaagtcagcggc
gacacctaccgcctgtcggatacgcaggtccgcgccattctcgacctgcgcctgcatcgc
ctgaccgcgctgggccgcgacgagatcggcaatgaactggccgaactcgccgctgccatc
gcggaatatctcgccatcctcggtgaccgggtgaaactctatgcggtcatgcgcgaggag
ttcgaggcgatcgagcgcgacttcgcgaccccgcgcctttcggaaatcaccgccgccgcc
gatggcatcgacgatgaagacctgatcgagcgcgaggagatggtcgtcaccgtcaccgtg
cagggctatatcaagcgcacgcccttggagagcttccgcgcccaggcgcgcggcggcaag
ggccgctccggcatgacgaccaaggatgaggacgcgatcaccgaactgttcgtgacctcc
acgcatacgccggtccttttcttctccaccgctggcaaggtctatcgcctcaaggtctgg
cgcctgccggaaggcggcccggcgacgcgtggccgcccgatggtgaacctgctgccgctc
ggccccggcgagacgatccagaccgtcctgccgctgcccgaagatgaggaaagctggaag
gatctgcacgtcatgttcgccaccgcgaacggcacggtccgccgcaacagcatggacgcc
ttcgccaacattccgtcgaacggcaagattgccatgcgcttcgatgatgacagcaccgac
cggctgatcggcgtggcgctcctctccgaagaggatgacgtcctgctcgccacccgtcag
ggcaaggcaatccgcttccaggcgaccgacgtgcgcgagttccagagccgcacctcgacc
ggcgtgcgcggcatgacgctcaagaaggacgatgaggtaatctcgctttccatcctcacc
cgctccggcgccaatcaggaggagcgcgacgattatctccgcttcgccccatggaaggcg
gagaaggaaggctcgccgcagatgagcgctgagcgctttgccgaattgcaggcgaaggag
cagttcatcctcaccgtctgcgccaatggctatggcaagctgtcctcggcttacgactat
cgccgcaccggacgcggcggtcaggggatcacgaacatcgacaatatcggccgcaacggt
ccggtcgtcgcgagcttcccggcgcggcatggcgaccatctgatgctcgtcaccgatcag
gccaagctgatccgcatgggccttgaaagcctgcgcgtcatcggccgcagctcggcgggc
gtgcgcctcttcaacgtatccgacgacgaacatgtcgtcagcgccgcgaagatcgaggaa
agcgacgaagccgaagaggcggtggaaaccggttcggagacgggcgaggcgtga
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