Sphingobium sp. TKS: K426_13400
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Entry
K426_13400 CDS
T04965
Name
(GenBank) lytic transglycosylase catalytic subunit
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spht01011
]
K426_13400
Enzymes [BR:
spht01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
K426_13400
Peptidoglycan biosynthesis and degradation proteins [BR:
spht01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
K426_13400
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Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AMK23612
UniProt:
A0A126RNF0
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Position
1:2674109..2675911
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AA seq
600 aa
AA seq
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MIRAVTRSSWLAAVAFTALAAMPANADTTSAVSALSMGMPSSPLQLSDTDKSRYSAIYGA
LRDQKWTDARAMITALDAQDAIRPVALAELYLGKNSPKVELFELLDLINKAPWLDKADQL
SRLAQKRGATILPTLPQVQKMVWLGSAPRREYVPAVKTDALAQTLVGQIQPFIKNDDPAG
AEALLISGEAGLTPEGLTEVRQRIAWAYYIESDDANARRMAARALESRSGGDWAVQAYWT
TGLAAWRQNDCRAAAPAFANVTALAGNSDMRAAGAYWAARAYMVCGEPEKVENLLKTAAR
SDESFYGLLARETLAMPLGAGPVAPRFGAAEWQQLKDSPNVRAAIALSAIGENARADQML
RYQAKIGGTGQYDALLRLAGALSLPETQLWLAHNGPVGKQPGSFARFPAPDWRPDGGWRV
DPALVYAHTLQESGFRRDVVSSAGARGLMQVLPSTGNLMGLAASDQLFVPSTNMEYGQRY
LENLRDMSATGGLLPKVMAAYNAGPLPVERWNSEVKDNGDPLLFIESLPYYETRAYVNIV
MRNYWMYQIQAKGSAESLAGMAQGLWPTFPGAKGTRLVRLTPRTPMASANVSASIAGGSD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgcgccgtaacccgttcgtcctggctggccgccgttgccttcacagcattggcg
gccatgcccgcaaacgccgacacgaccagcgcggtatccgccctttccatgggcatgcct
tcatccccgcttcaattgagcgataccgataaaagccggtacagcgccatttacggagcc
ttgcgcgaccagaaatggactgatgccagggcgatgatcaccgcgctggatgcgcaggac
gccatccgcccggtcgccctggccgaactttatctcggcaagaattcgcccaaggtcgaa
ttgttcgaactgctcgatctgatcaacaaggcgccatggctcgacaaggccgatcagctt
tcccggctggcgcaaaaacgcggcgcgaccatcttgcccacgctgccgcaggtgcagaag
atggtctggctgggcagcgcgccgcgccgcgaatatgttccggccgtcaagaccgacgcc
ctggcccagacgctagtcggccagattcagcccttcatcaagaatgatgatccggccggt
gccgaagcgctgctcatcagtggcgaagcgggtctgacgcccgagggactgaccgaagtg
cggcagcgcatcgcctgggcctattatatcgaaagcgacgacgccaatgcccggcgcatg
gcggcaagggccctggaaagccgcagcggcggcgattgggcggttcaggcctattggacg
accggccttgccgcctggcgccagaatgattgccgcgccgccgcgcctgccttcgccaat
gtcacggcactggccggcaatagcgacatgcgcgcggcgggcgcctattgggcggcacgc
gcctatatggtgtgcggggaacctgaaaaggtcgaaaatctgctgaagacggccgcccgt
tcggacgaaagcttttatggcctgctggcgcgtgaaacgctggcgatgccgttgggcgct
gggccagtcgcgcctcgcttcggcgctgcggaatggcagcaactcaaggacagcccgaat
gtgcgggcggcgatcgctctgtctgcgatcggtgagaatgcgcgggcggaccagatgctt
cgctatcaggcgaagatcggcgggaccgggcaatatgatgcgctgcttcgcctggccggc
gcgctgagcctgccggaaacgcagctctggcttgctcataacggcccggtgggcaagcag
ccgggcagcttcgcgcgctttccggcacccgactggcggccggacggcggatggcgggtc
gacccggcgctggtttatgcccacacgcttcaggaatcgggattccgccgggatgtcgtc
agcagcgccggtgcgcgcggcctgatgcaggtgctgcccagcaccggcaatctgatgggg
ctagccgcgtccgaccagttgttcgtgccgtcgaccaatatggaatatggccagcgctat
ctggaaaatctgcgcgacatgagcgcgaccggcggattgctgcccaaggtcatggccgcc
tataatgccggtcctctgccggtcgagcgttggaacagcgaagtgaaggacaatggcgat
ccgctgctgttcatcgaatcgctgccctattatgaaacccgcgcctatgtgaacatcgtg
atgcgcaattactggatgtatcagatccaggcgaagggcagcgcggagtcgctggcgggc
atggcgcagggtctgtggccgaccttcccaggggccaagggcacgcgtctcgtgcgcctg
acgcccaggacgccgatggccagcgcaaatgtcagcgccagcatcgcgggcggctccgac
tga
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