Sphingobium sp. TKS: K426_13500
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Entry
K426_13500 CDS
T04965
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spht
Sphingobium sp. TKS
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spht03400
]
K426_13500
Enzymes [BR:
spht01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K426_13500
DNA repair and recombination proteins [BR:
spht03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K426_13500
Prokaryotic type
K426_13500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMK23632
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All DBs
Position
1:complement(2697363..2698739)
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AA seq
458 aa
AA seq
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MPNPVLVWFRQDLRLADQAALAAAVQEGPVIPVYVLDDQAPRQWKIGGASRWWLHHSVTS
LDENLRDRGSRLILRQGDCIDQLTQIAEETGARRVHALHHYEPWWRNAEKALAKRLDLCL
HDGGLLLPPGAVRTGGGNSYRIYTPFARAVMEQMPPAAPAHAPSHIDAPPQWPKSDSLDD
WRLLPTKPDWAAAFSRDWTPGEAGARANVAAFLDKAADYDRARNLPSQEGSSRLSPHLHF
GEVSPAYVWHRVAGAPGDATTFLKELIWRDYAHTQIWAMPTYGSENAREAFDAMPWRDLG
EAGSDFEAWKTGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLIKHLLIDWRHGARWFW
DTLVDASYANNSVNWQWVAGSGVDANIFSRIMAPLTQSEKFDAAGYIRTWVPELAHLDDD
RIHDPDIHGVRPPDYPAKCIGHREGRESALAAWRHCKP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaccccgttctcgtctggtttcgccaggatctgcgccttgccgatcaggccgcg
ctggccgccgccgtgcaggaggggccggtgattcccgtctatgtgctggacgatcaggcg
ccccgtcagtggaaaatcggcggtgcatcgcgctggtggctgcatcacagcgtcaccagt
ctggatgaaaatctgcgggacaggggttcccgcctgattctgaggcaaggcgactgcatc
gatcagctcacccaaattgccgaggagactggagcccggcgcgttcatgcgctgcaccat
tatgagccatggtggcgcaatgcggaaaaggcgctcgccaaaaggctggacctttgcctg
cacgatggcgggttgttgttgccgccgggtgcggtgcggacgggcggaggaaacagctat
cgaatctacacgcccttcgcgcgcgccgtgatggaacagatgccccccgctgcgccagcc
catgcgccctcgcatatagatgcgcctccgcaatggccgaaaagcgattcgctcgacgat
tggcggcttttgccgacgaagccggattgggccgcagccttttcccgcgattggacgcct
ggcgaggcgggggcacgggccaatgtcgcggcatttctggacaaggcggcggattatgac
agagcgcggaacctgccgtcgcaggagggaagctcgcgcctttcgccccatctccatttc
ggggaagtgtcgcccgcctatgtctggcaccgggtcgccggagcgcccggcgatgcgacc
accttcctcaaggaattgatctggcgcgactatgctcacacccagatctgggcgatgccc
acttatggttccgaaaatgcgcgggaggcgttcgacgccatgccctggcgcgatcttgga
gaggccggaagcgattttgaggcgtggaaaaccgggcgcaccggctatccgatcgtcgat
gcggggatgcgccagctctggacgaccggctggatgcacaatcgcgtccgcatgatcgcg
gcaagtttcctgatcaagcatctgctgatcgactggcggcacggcgcgcgctggttctgg
gatacgctggtcgatgcaagctacgccaataacagcgtcaactggcaatgggttgcgggc
agcggcgtcgatgccaatatcttttcgcgtatcatggcgcccctgacacagtcggaaaaa
ttcgacgccgccggctatatcaggacatgggtgccggagctggcgcatctggacgatgat
cgcattcacgaccccgacattcatggcgtgcgcccgcccgattatccggccaagtgcatc
ggccacagggaaggacgggagagcgcactggccgcctggcgtcactgcaagccatga
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